RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NPEPL1Q8NDH3 523 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 OR8B4Q96RC9 309 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CUTCQ9NTM9 273 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 GCM2O75603 506 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 P04436 131 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CRHP06850 196 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 HLA-DOBP13765 273 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 FABP4P15090 132 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 AVPR2P30518 371 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 EMDP50402 254 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 NOVA1P51513 510 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PKIAP61925 76 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 IL13RA2Q14627 380 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SLC16A14Q7RTX9 510 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MITD1Q8WV92 249 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MVB12AQ96EY5 273 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PBOV1Q9GZY1 135 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZBP1Q9H171 429 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 UCK1Q9HA47 277 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PLXNA3P51805 1871 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 A0A087X0M5 115 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 A0A1B0GX30 115 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TNFRSF10CO14798 259 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SYNGR4O95473 234 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PVRP15151 417 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CD96P40200 585 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PPICP45877 212 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 DHODHQ02127 395 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 GGNBP1Q5YKI7 109 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 OR11H4Q8NGC9 324 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 AKR7LQ8NHP1 331 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PIK3IP1Q96FE7 263 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 USB1Q9BQ65 265 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 OBP2AQ9NY56 170 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SLC23A2Q9UGH3 650 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZFAND5O76080 213 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PLGLB1Q02325 96 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PINX1Q96BK5 328 aaKnown RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 TECTBQ96PL2 329 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PRRX2Q99811 253 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 SUCNR1Q9BXA5 334 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 NPDC1Q9NQX5 325 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 V9GYS6 101 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CLDN34H7C241 214 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 DOK2O60496 412 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CD63P08962 238 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 APLNRP35414 380 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CATR1Q13166 79 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF660Q6AZW8 331 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CBLN2Q8IUK8 224 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 WBP2Q969T9 261 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 SIRT7Q9NRC8 400 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 GDF2Q9UK05 429 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 POM121BA6NF01 834 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 GLAP06280 429 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 HTR5AP47898 357 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 C1orf61Q13536 156 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM183BQ1AE95 376 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PTBP3O95758 552 aaKnown RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 C1QCP02747 245 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 LINC01555Q8NAE3 123 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OR51E1Q8TCB6 317 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PTX4Q96A99 478 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 ANAPC16Q96DE5 110 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 WSB2Q9NYS7 404 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 HSD17B6O14756 317 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 WDR38Q5JTN6 314 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 BRICD5Q6PL45 260 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OR5D18Q8NGL1 313 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OR1E3Q8WZA6 343 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 FGF13Q92913 245 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PGLYRP3Q96LB9 341 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 NUDT22Q9BRQ3 303 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 MS4A7Q9GZW8 240 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 B9D1Q9UPM9 204 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 RLFQ13129 1914 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PTPRDP23468 1912 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 FRG2CA6NGY1 282 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 OLFM2O95897 454 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 HIST1H1DP16402 221 aaKnown RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CLDN17P56750 224 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 SURF2Q15527 256 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PABPC1L2AQ5JQF8 200 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 ST8SIA1Q92185 356 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CAPNS2Q96L46 248 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CDCA3Q99618 268 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 TRPM6Q9BX84 2022 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 CHST11Q9NPF2 352 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 DNAJB12Q9NXW2 375 aaKnown RBP4.31□□□□□ -1.72
CSMD3-203ENST00000343508 B4GALT7Q9UBV7 327 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 TBC1D29Q9UFV1 150 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 LAMP3Q9UQV4 416 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 ABHD16AO95870 558 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 PGA3P0DJD8 388 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 TBXA2RP21731 343 aa4.31□□□□□ -1.72
CSMD3-203ENST00000343508 DTYMKP23919 212 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms