RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CCDC190Q86UF4 302 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR2AK2Q8NG84 335 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR5M11Q96RB7 305 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MRPS28Q9Y2Q9 187 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 VAMP5O95183 116 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SRSF4Q08170 494 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 SELENBP1Q13228 472 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MS4A13Q5J8X5 152 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ELFN2Q5R3F8 820 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MRGPRX2Q96LB1 330 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 DERL1Q9BUN8 251 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 PLA2G12AQ9BZM1 189 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 PSG11Q9UQ72 335 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 HES2Q9Y543 173 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 GPR45Q9Y5Y3 372 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CFAP20Q9Y6A4 193 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 CCDC168Q8NDH2 2452 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 VEGFDO43915 354 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 COX7A2P2O60397 106 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 APCSP02743 223 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CRYBA1P05813 215 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 HAPLN1P10915 354 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 ZNF26P17031 533 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 ELAVL4P26378 380 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR1D4P47884 311 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 PLPP7Q8NBV4 271 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR8A1Q8NGG7 326 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR52I2Q8NH67 350 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SIGLEC10Q96LC7 697 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TBX15Q96SF7 602 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SMOQ99835 787 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 DHRS4Q9BTZ2 278 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CRXO43186 299 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 STATHP02808 62 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SLC35E2P0CK97 266 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CLDN12P56749 244 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 GRM7Q14831 915 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 NSDHLQ15738 373 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 BSXQ3C1V8 233 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 Q56UQ5 140 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 PLXDC2Q6UX71 529 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 FAM57BQ71RH2 274 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CLDN19Q8N6F1 224 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CELF5Q8N6W0 485 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 FUBP3Q96I24 572 aaKnown RBP eCLIP5.64□□□□□ -1.51
VCAN-203ENST00000343200 SGK494Q96LW2 274 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 S1PR3Q99500 378 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TLN1Q9Y490 2541 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 SMIM35A0A1B0GVV1 85 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 PQLC2LA1A4F0 135 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 EIF3GO75821 320 aaKnown RBP eCLIP5.64□□□□□ -1.51
VCAN-203ENST00000343200 GASTP01350 101 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SMPD1P17405 629 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 POLR2GP62487 172 aaKnown RBP eCLIP5.64□□□□□ -1.51
VCAN-203ENST00000343200 ENTPD8Q5MY95 495 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 HIST1H4GQ99525 98 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SAP30LQ9HAJ7 183 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ACANP16112 2415 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CLEC18AA5D8T8 446 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 H3BMH7 237 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ACP5P13686 325 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 VIPR2P41587 438 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ZNF345Q14585 488 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 HSPB2Q16082 182 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ZFAND6Q6FIF0 208 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MBOAT2Q6ZWT7 520 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CLEC18CQ8NCF0 446 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 BEND2Q8NDZ0 799 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TFAP2BQ92481 460 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TOE1Q96GM8 510 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 C2orf50Q96LR7 162 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ADAT1Q9BUB4 502 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 PDZD7Q9H5P4 517 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 PRTFDC1Q9NRG1 225 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 DNMT3BQ9UBC3 853 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 TNRC6CQ9HCJ0 1690 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 COL3A1P02461 1466 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 LRRC30A6NM36 301 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MFNGO00587 321 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 BCL3P20749 454 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 GPX3P22352 226 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ASCL1P50553 236 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ID2Q02363 134 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SP3Q02447 781 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ADGRA1Q86SQ6 560 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ADAMTS17Q8TE56 1095 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 LRRC15Q8TF66 581 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TEX101Q9BY14 249 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 TMEM262E9PQX1 116 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 MBPP02686 304 aaPredicted RBP5.63□□□□□ -1.51
VCAN-203ENST00000343200 IL5P05113 134 aa5.63□□□□□ -1.51
VCAN-203ENST00000343200 DAPP51397 102 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms