RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TERB2Q8NHR7 220 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 YIPF5Q969M3 257 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 SMIM19Q96E16 107 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 FSCN3Q9NQT6 498 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 MED9Q9NWA0 146 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 SSC5DA1L4H1 1573 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 OR5H8P0DN80 308 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 S100A11P31949 105 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 CASP3P42574 277 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 ISL1P61371 349 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-202ENST00000342494 DRAXINQ8NBI3 349 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-202ENST00000342494 KTI12Q96EK9 354 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-202ENST00000342494 GABARAPL3Q9BY60 117 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 PRDM7Q9NQW5 492 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 NDUFB11Q9NX14 153 aa13.52□□□□□ -0.25
UBE3B-202ENST00000342494 CDC14BO60729 498 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 DDOSTP39656 456 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 OR13C5Q8NGS8 318 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 FBXW5Q969U6 566 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 TAF9BQ9HBM6 251 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 MGMTP16455 207 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 PTBP1P26599 531 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 C2orf76Q3KRA6 126 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 C1orf53Q5VUE5 145 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 MOB3AQ96BX8 217 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 PCYT1BQ9Y5K3 369 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SPRY1O43609 319 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SCGB1D1O95968 90 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 CDK5R1Q15078 307 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 CTU2Q2VPK5 515 aaKnown RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 ST8SIA5O15466 376 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 MRGPRX3Q96LB0 322 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SOX7Q9BT81 388 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 HES4Q9HCC6 221 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 STRAPQ9Y3F4 350 aaKnown RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 GLI3P10071 1580 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 PRDX4Q13162 271 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 DMRTC1Q5HYR2 192 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SLC7A6Q92536 515 aa13.51□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-202ENST00000342494 SSSCA1O60232 199 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 OR10R2Q8NGX6 335 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 APOBEC4Q8WW27 367 aaKnown RBP13.5□□□□□ -0.25
UBE3B-202ENST00000342494 CIB3Q96Q77 187 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-202ENST00000342494 IKZF5Q9H5V7 419 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 LHX9Q9NQ69 397 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 OR7C2O60412 319 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 CTSVO60911 334 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 H2AFB1P0C5Y9 115 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF117Q03924 483 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 CARFQ8N187 725 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 ATF1P18846 271 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 RAB5CP51148 216 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 VMA21Q3ZAQ7 101 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 STUMQ69YW2 141 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 TMEM182Q6ZP80 229 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-202ENST00000342494 OR2G2Q8NGZ5 317 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 PELI1Q96FA3 418 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 GABRG3Q99928 467 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 TMEM30CPA0ZSE6 113 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 IAPPP10997 89 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 THBS4P35443 961 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 PRR7Q8TB68 274 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 CCL17Q92583 94 aa13.5□□□□□ -0.25
UBE3B-202ENST00000342494 MT-ND4LP03901 98 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 TMIGD3P0DMS9 266 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-202ENST00000342494 GNG3P63215 75 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 STAC2Q6ZMT1 411 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 PTOV1Q86YD1 416 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 CT55Q8WUE5 264 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 FZR1Q9UM11 496 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-202ENST00000342494 METTL15P1P0C7V9 234 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 FZD5Q13467 585 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 OR10K2Q6IF99 312 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 PXT1Q8NFP0 134 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 GPX8Q8TED1 209 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 CACFD1Q9UGQ2 172 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 GOSR1O95249 250 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 Q8IYB0 196 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 OR8U1Q8NH10 309 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 OR2T6Q8NHC8 308 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 PP6455Q8WZ26 134 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 CDCA4Q9BXL8 241 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 TAGLN2P37802 199 aaKnown RBP13.49□□□□□ -0.25
UBE3B-202ENST00000342494 OR2T2Q6IF00 324 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 CELF2-AS1Q8N7Q2 184 aa13.49□□□□□ -0.25
UBE3B-202ENST00000342494 KCNE3Q9Y6H6 103 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms