RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 SLC9A3R2Q15599 337 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 PCK2Q16822 640 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 RUSC1-AS1Q66K80 236 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 LCN8Q6JVE9 175 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 RBMS3Q6XE24 437 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 DPY19L4Q7Z388 723 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 HS3ST5Q8IZT8 346 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 PARP8Q8N3A8 854 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 LINC00471Q8N535 108 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 OR10G2Q8NGC3 310 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 OR8B3Q8NGG8 313 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 OR11L1Q8NGX0 322 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 Q8TCH9 128 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 OR8B2Q96RD0 313 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 FEVQ99581 238 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 DGCR6LQ9BY27 220 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 REEP1Q9H902 201 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 NDE1Q9NXR1 346 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
NUDCD3-201ENST00000338427 A0A1B0GW55 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 ACOT8O14734 319 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 GYPAP02724 150 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 SFTPBP07988 381 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 HKR1P10072 659 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 POU1F1P28069 291 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 PSMB10P40306 273 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 SLC25A1P53007 311 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 HCCSP53701 268 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 FAM3AP98173 230 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 OR8B8Q15620 311 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 RPL13AP3Q6NVV1 102 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DRAM2Q6UX65 266 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 BTNL3Q6UXE8 466 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 LRRN1Q6UXK5 716 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DCDC5Q6ZRR9 648 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 ERI1Q8IV48 349 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 C1orf87Q8N0U7 546 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 GIPC3Q8TF64 312 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 UPRTQ96BW1 309 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 CCDC124Q96CT7 223 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 PLEKHA8Q96JA3 519 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 ADAT1Q9BUB4 502 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 ABHD6Q9BV23 337 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 CHID1Q9BWS9 393 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 OR51V1Q9H2C8 321 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 MMADHCQ9H3L0 296 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 MAGIXQ9H6Y5 334 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 SMURF1Q9HCE7 757 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 CLN8Q9UBY8 286 aa11.11□□□□□ -0.63
NUDCD3-201ENST00000338427 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 LGALS8O00214 317 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 ADAM20O43506 726 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 GMDSO60547 372 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 PLATP00750 562 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 TFF1P04155 84 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 ANXA2P07355 339 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 OMGP23515 440 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 CX3CR1P49238 355 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 MNAT1P51948 309 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 KLHL12Q53G59 568 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 TEX30Q5JUR7 227 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 FAM57BQ71RH2 274 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 SLC16A9Q7RTY1 509 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 PRSS45Q7RTY3 260 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 ADGRG5Q8IZF4 528 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 OR6N2Q8NGY6 317 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 CANT1Q8WVQ1 401 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 ZMYND19Q96E35 227 aaPredicted RBP11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 TECTBQ96PL2 329 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 PCGF1Q9BSM1 259 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 THTPAQ9BU02 230 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
NUDCD3-201ENST00000338427 A6NLC8 198 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 H3BN98 237 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 FSTL3O95633 263 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 CST1P01037 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms