RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PRELID3BQ9Y3B1 194 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 XRCC2O43543 280 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 FADS1O60427 444 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 IGKV3-11P04433 115 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF611Q8N823 705 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF416Q9BWM5 594 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 HLA-DOBP13765 273 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 S100A11P31949 105 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 CSF2RBP32927 897 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 OR52H1Q8NGJ2 320 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PSMF1Q92530 271 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 TCFL5Q9UL49 500 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 TO15178 435 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 S100A6P06703 90 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PPP3CBP16298 524 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PRSS35Q8N3Z0 413 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 OR6S1Q8NH40 331 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 TEX51A0A1B0GUA7 166 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 A0A1B0GUH1 482 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 SNRPGP15A8MWD9 76 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 SULT1C2O00338 296 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 AKR7LQ8NHP1 331 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 YIPF5Q969M3 257 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 CRLF2Q9HC73 371 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 OBP2BQ9NPH6 170 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 GREB1Q4ZG55 1949 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 ANKRD20A5PA0PJZ0 165 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PNLIPP16233 465 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 RFX2P48378 723 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 RAG2P55895 527 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PPIAP62937 165 aaKnown RBP5.62□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF616Q08AN1 781 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 IKZF1Q13422 519 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 CACNA1IQ9P0X4 2223 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 NPIPB9F8W1W9 429 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 TPOP07202 933 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 FAHP16930 419 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 RGS19P49795 217 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 OR2M3Q8NG83 312 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 OR10R2Q8NGX6 335 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 DNTTIP1Q9H147 329 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 WDR54Q9H977 334 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 GMDSO60547 372 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 SERPINE2P07093 398 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 MECP2P51608 486 aaKnown RBP5.62□□□□□ -1.51
PRKDC-202ENST00000338368 RAC3P60763 192 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 MC2RQ01718 297 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 INPP5JQ15735 1006 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PLSCR3Q9NRY6 295 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 LHX6Q9UPM6 363 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 PCDHGA5Q9Y5G8 931 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 CACNA1EQ15878 2313 aa5.62□□□□□ -1.51
PRKDC-202ENST00000338368 TXNDC12O95881 172 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 OR11G2Q8NGC1 345 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 M1APQ8TC57 530 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ASB10Q8WXI3 467 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CPNE4Q96A23 557 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CCDC86Q9H6F5 360 aaKnown RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ZFP57Q9NU63 452 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CACFD1Q9UGQ2 172 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 FANCMQ8IYD8 2048 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 C17orf51A8MQB3 221 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 DCTN6O00399 190 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CD1AP06126 327 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 NPY4RP50391 375 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 DRAM2Q6UX65 266 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CREB3L2Q70SY1 520 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 PPP1R35Q8TAP8 253 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 NELFAQ9H3P2 528 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 A0A096LPE4 126 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 A0A1W2PPZ6 126 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 MGMTP16455 207 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 NUBP1P53384 320 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 IAH1Q2TAA2 248 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 DTWD2Q8NBA8 298 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 OR10D3Q8NH80 312 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ADIPOR1Q96A54 375 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 AMELYQ99218 206 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 TGIF2Q9GZN2 237 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 A0A0D9SG52 128 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 PDGFBP01127 241 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 OR1C1Q15619 314 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 RFPL4BQ6ZWI9 263 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 TCEAL3Q969E4 200 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 REEP6Q96HR9 211 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 CNOT4O95628 575 aaKnown RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 TGM6O95932 706 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 OR4E1P0C645 316 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ZP4Q12836 540 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 GPX7Q96SL4 187 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 SPSB2Q99619 263 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 SHISA7A6NL88 538 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 EGR4Q05215 589 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 GGTLC2Q14390 218 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 BATF2Q8N1L9 274 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 RNF133Q8WVZ7 376 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ASB13Q8WXK3 278 aa5.61□□□□□ -1.51
PRKDC-202ENST00000338368 ALKBH3Q96Q83 286 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-202ENST00000338368 KLHDC2Q9Y2U9 406 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms