RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ETV1P50549 477 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 MMP15P51511 669 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 CCR9P51686 369 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 GBX2P52951 348 aaPredicted RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 DEFB113Q30KQ7 82 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 CATSPERDQ86XM0 798 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 PELI1Q96FA3 418 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 DIRC2Q96SL1 478 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 CACNG6Q9BXT2 260 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 ISG20L2Q9H9L3 353 aaKnown RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 BABAM2Q9NXR7 383 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 ERGIC3Q9Y282 383 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 TACC2O95359 2948 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 PDZD2O15018 2839 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 CADP27708 2225 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 C5orf63A6NC05 138 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 GGT3PA6NGU5 568 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 ADRA2AP08913 450 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 ATP6V1B1P15313 513 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 FAM3AP98173 230 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 MVKQ03426 396 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
SEC13-201ENST00000337354 CCDC58Q4VC31 144 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 OR2T2Q6IF00 324 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 OR2AE1Q8NHA4 323 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
SEC13-201ENST00000337354 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 CLEC2DQ9UHP7 191 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 GTF2A1LQ9UNN4 478 aa13.14□□□□□ -0.31
SEC13-201ENST00000337354 LOC390937A0A1W2PQ73 354 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 RGS10O43665 173 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 MRPS14O60783 128 aaKnown RBP13.13□□□□□ -0.31
SEC13-201ENST00000337354 MTRF1O75570 445 aaKnown RBP13.13□□□□□ -0.31
SEC13-201ENST00000337354 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 TTRP02766 147 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 HTR1AP08908 422 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 ANOS1P23352 680 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 ALDH3B1P43353 468 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 TGM4P49221 684 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 ZNF81P51508 661 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 CCDC54Q8NEL0 328 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 OR13G1Q8NGZ3 307 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 OR2G2Q8NGZ5 317 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
SEC13-201ENST00000337354 VRK1Q99986 396 aaPredicted RBP13.13□□□□□ -0.31
SEC13-201ENST00000337354 NKIRAS2Q9NYR9 191 aa13.13□□□□□ -0.31
SEC13-201ENST00000337354 RAI1Q7Z5J4 1906 aaPredicted RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 MYL12BO14950 172 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 ISG15P05161 165 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 ADH4P08319 380 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 UBCP0CG48 685 aaKnown RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 CDKN1AP38936 164 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PSMB10P40306 273 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 GSK3AP49840 483 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 OR8B8Q15620 311 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 ALKBH6Q3KRA9 238 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 TMEM244Q5VVB8 128 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PRSS48Q7RTY5 328 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PRSS35Q8N3Z0 413 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 OR51E1Q8TCB6 317 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PPP1R14AQ96A00 147 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 BARX1Q9HBU1 254 aaPredicted RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 TMEM100Q9NV29 134 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 PAK1IP1Q9NWT1 392 aaPredicted RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 NOP16Q9Y3C1 178 aaKnown RBP13.12□□□□□ -0.31
SEC13-201ENST00000337354 SPG11Q96JI7 2443 aa13.12□□□□□ -0.31
SEC13-201ENST00000337354 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
SEC13-201ENST00000337354 NAT2P11245 290 aa13.11□□□□□ -0.31
SEC13-201ENST00000337354 ZNF12P17014 697 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms