RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RAB7BQ96AH8 199 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 PGLYRP3Q96LB9 341 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 C8orf33Q9H7E9 229 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CA14Q9ULX7 337 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 DAPP1Q9UN19 280 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 OR2M5A3KFT3 312 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 RPS15P62841 145 aaKnown RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ACKR1Q16570 336 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 TMEM151BQ8IW70 566 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 GPR137CQ8N3F9 429 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 GDF15Q99988 308 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ATG101Q9BSB4 218 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 REG4Q9BYZ8 158 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 TPSD1Q9BZJ3 242 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 FRRS1LQ9P0K9 344 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 A0A0A6YYD5 115 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 TERTO14746 1132 aaKnown RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 CHRM2P08172 466 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 CARD18P57730 90 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 PKIAP61925 76 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 GAMTQ14353 236 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 FAM78AQ5JUQ0 283 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 BORCS8Q96FH0 119 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 C4orf45Q96LM5 186 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF426Q9BUY5 554 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 MRM2Q9UI43 246 aaKnown RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ACAD8Q9UKU7 415 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ENTPD2Q9Y5L3 495 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 SVILO95425 2214 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 E5RGE8 158 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 MFNGO00587 321 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 SSSCA1O60232 199 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 PDGFBP01127 241 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 LCATP04180 440 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 NSDHLQ15738 373 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ANKRD33Q7Z3H0 272 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 TBX21Q9UL17 535 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.93□□□□□ -0.5
COL2A1-201ENST00000337299 NSG2Q9Y328 171 aa11.93□□□□□ -0.5
COL2A1-201ENST00000337299 SERTM1A2A2V5 107 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 CD300LBA8K4G0 201 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 OR1D4P47884 311 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 DHRS11Q6UWP2 260 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
COL2A1-201ENST00000337299 SMIM7Q9BQ49 75 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 SOSTQ9BQB4 213 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 PLEK2Q9NYT0 353 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 DOK5Q9P104 306 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ZMIZ1Q9ULJ6 1067 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 NCOR1O75376 2440 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 LINC01553A4QN01 128 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 VSTM2BA6NLU5 285 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 MTCP1P56278 107 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF124Q15973 351 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 METRNLQ641Q3 311 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 FCRL6Q6DN72 434 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 THNSL2Q86YJ6 484 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 LIPGQ9Y5X9 500 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 CCDC187A0A096LP49 1063 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF205O95201 554 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 PNLIPRP2P54317 469 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 HTD2P86397 168 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 DUSP2Q05923 314 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 EIF4EBP2Q13542 120 aaPredicted RBP11.92□□□□□ -0.5
COL2A1-201ENST00000337299 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 WDR92Q96MX6 357 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 GPR173Q9NS66 373 aa11.92□□□□□ -0.5
COL2A1-201ENST00000337299 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
COL2A1-201ENST00000337299 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
COL2A1-201ENST00000337299 M0R143 59 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PIN1P1O15428 100 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 LPAR6P43657 344 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PPP2CBP62714 309 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PPP2CAP67775 309 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 OR8G1Q15617 311 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
COL2A1-201ENST00000337299 EPHX3Q9H6B9 360 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms