RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 HIST1H1CP16403 213 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 EBPQ15125 230 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 BAGE3Q86Y29 109 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 BAGE2Q86Y30 109 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 PELI3Q8N2H9 469 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 NANOGP1Q8N7R0 232 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 FOXN4Q96NZ1 517 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 DEFB127Q9H1M4 99 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 FLVCR1Q9Y5Y0 555 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 PXT1Q8NFP0 134 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 SLC35D1Q9NTN3 355 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 RPH3ALQ9UNE2 315 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 RPL18Q07020 188 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 PHLDA2Q53GA4 152 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 TRMT61AQ96FX7 289 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 SELENOFO60613 162 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 HOXD4P09016 255 aaPredicted RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 ACKR3P25106 362 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 KCNJ3P48549 501 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 CCL7P80098 99 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 OR10K2Q6IF99 312 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 GIPP09681 153 aaPredicted RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 A0A1W2PN81 502 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 TRAPPC2P0DI81 140 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 TRAPPC2BP0DI82 140 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 CHRNA7P36544 502 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 NPY4RP50391 375 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 UBE2IP63279 158 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 MBNL1Q9NR56 388 aaKnown RBP11.11□□□□□ -0.63
FN1-202ENST00000336916 ATP6V1G2-DDX39BF2Z307 99 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 SOX15O60248 233 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 ACTL6AO96019 429 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 SLC25A1P53007 311 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 VMA21Q3ZAQ7 101 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 YIPF5Q969M3 257 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
FN1-202ENST00000336916 AGPAT2O15120 278 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 DEGS2Q6QHC5 323 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 LAX1Q8IWV1 398 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 H7C1C5 153 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 SNRPBP14678 240 aaKnown RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 OR1C1Q15619 314 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 ACKR1Q16570 336 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 C17orf107Q6ZR85 190 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR52N5Q8NH56 324 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 IKZF5Q9H5V7 419 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 DENND4AQ7Z401 1863 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 G3V3Y1 287 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 H2AFB1P0C5Y9 115 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 SPI1P17947 270 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 COX5AP20674 150 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 EMP3P54852 163 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 BHLHE23Q8NDY6 225 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 PPIL1Q9Y3C6 166 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 NYNRINQ9P2P1 1898 aaKnown RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 NCBP2LA6PVI3 153 aaKnown RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 SNRPGP15A8MWD9 76 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 GOSR1O95249 250 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 TCRBP04435 133 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR6C3Q9NZP0 311 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 CHEK1O14757 476 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 BRS3P32247 399 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR1F12Q8NHA8 337 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 SLAMF8Q9P0V8 285 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 TAAR3PQ9P1P4 343 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
FN1-202ENST00000336916 DYSFO75923 2080 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 NCR1O76036 304 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 BSGP35613 385 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 TRNP1Q6NT89 227 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 TMEM81Q6P7N7 255 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 OR10AD1Q8NGE0 317 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 CACNA1HO95180 2353 aa11.1□□□□□ -0.63
FN1-202ENST00000336916 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 PHYHD1Q5SRE7 291 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 ACOT7LQ6ZUV0 252 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 PECRQ9BY49 303 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 BARX1Q9HBU1 254 aaPredicted RBP11.09□□□□□ -0.63
FN1-202ENST00000336916 A0A0A6YYD5 115 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 SOCS6O14544 535 aa11.09□□□□□ -0.63
FN1-202ENST00000336916 T-ENOLP0DO92 83 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms