RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TIAL1Q01085 375 aaKnown RBP eCLIP7.72□□□□□ -1.17
TDP1-201ENST00000335725 DCAF8Q5TAQ9 597 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 FAM71F2Q6NXP2 309 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 LBX2Q6XYB7 198 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 COMMD6Q7Z4G1 85 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TCEAL8Q8IYN2 117 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 OR4P4Q8NGL7 312 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 SFRP2Q96HF1 295 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ZNF607Q96SK3 696 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ISG20L2Q9H9L3 353 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 SIRT4Q9Y6E7 314 aaPredicted RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 IFITM5A6NNB3 132 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 PRH1P02810 166 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ATXN8OSP0DMR3 200 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ACP5P13686 325 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 PMP22Q01453 160 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ENTPD8Q5MY95 495 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 Q6ZN92 141 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 RNF175Q8N4F7 328 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ST6GALNAC3Q8NDV1 305 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 DNAJB3Q8WWF6 145 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 MACROD1Q9BQ69 325 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 FAM110AQ9BQ89 295 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 OR51I1Q9H343 314 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 MRPS16Q9Y3D3 137 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 C13orf42A0A1B0GVH6 325 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TMEM150BA6NC51 233 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 C4orf47A7E2U8 309 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 GPR32O75388 356 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 ANXA4P09525 319 aaPredicted RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 SEC11BP0C7V7 166 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 DANCRP0C864 163 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TSFMP43897 325 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 FAM3BP58499 235 aaPredicted RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 IL13RA1P78552 427 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 HLA-DRB3P79483 266 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 SCAPQ12770 1279 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TCEAL5Q5H9L2 206 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 BATF2Q8N1L9 274 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TMEM156Q8N614 296 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 NFKBIDQ8NI38 313 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 GUCD1Q96NT3 240 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 TMEM38BQ9NVV0 291 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 MARCH4Q9P2E8 410 aaPredicted RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 NINQ8N4C6 2090 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 SLC38A8A6NNN8 435 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 KLRC4-KLRK1H3BQV0 150 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 ESDP10768 282 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 GCH1P30793 250 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 SCAND1P57086 179 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 PAFAH1B2P68402 229 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 GPNMBQ14956 572 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 CCDC71LQ8N9Z2 235 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 MTMR14Q8NCE2 650 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 CACNG8Q8WXS5 425 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 OR7D2Q96RA2 312 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 NICN1Q9BSH3 213 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 TMEM106BQ9NUM4 274 aa7.71□□□□□ -1.17
TDP1-201ENST00000335725 SIDT1Q9NXL6 827 aaKnown RBP7.71□□□□□ -1.17
TDP1-201ENST00000335725 IGHV1-69-2A0A0G2JMI3 117 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 B3GALT4O96024 378 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 CHRM2P08172 466 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 RPS4Y1P22090 263 aaKnown RBP7.71□□□□□ -1.18
TDP1-201ENST00000335725 ADCYAP1R1P41586 468 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
TDP1-201ENST00000335725 CSNK2A1P68400 391 aaPredicted RBP7.71□□□□□ -1.18
TDP1-201ENST00000335725 PWWP2BQ6NUJ5 590 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 PNKDQ8N490 385 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 CSNK2A3Q8NEV1 391 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 HINT2Q9BX68 163 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 SLC39A8Q9C0K1 460 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 SH2B3Q9UQQ2 575 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 SIGLEC7Q9Y286 467 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 YIPF1Q9Y548 306 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 BTAF1O14981 1849 aa7.71□□□□□ -1.18
TDP1-201ENST00000335725 BORCS7-ASMTA0A0B4J1R7 106 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 HSD17B6O14756 317 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 GRM6O15303 877 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 IL2RAP01589 272 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 POU2F2P09086 479 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 FUT3P21217 361 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PRPH2P23942 346 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PRSS3P35030 304 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PTGER4P35408 488 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 MLF1P58340 268 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
TDP1-201ENST00000335725 SLC25A42Q86VD7 318 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 MYADMQ96S97 322 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 ABHD14AQ9BUJ0 271 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PKIBQ9C010 78 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 KATNBL1Q9H079 304 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms