RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HENMT1Q5T8I9 393 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 STRADAQ7RTN6 431 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 AMER3Q8N944 861 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MVB12AQ96EY5 273 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PITX2Q99697 317 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 AGRNO00468 2067 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 COL6A6A6NMZ7 2263 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 WDR27A2RRH5 827 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ADRB3P13945 408 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAB9AP51151 201 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 EDDM3BP56851 147 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SGCGQ13326 291 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 NKAIN4Q8IVV8 208 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 IGDCC4Q8TDY8 1250 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 P2RY11Q96G91 374 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2A5Q96R48 311 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRRX2Q99811 253 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM103A1Q9BTL3 118 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLEKHJ1Q9NW61 149 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SERTAD3Q9UJW9 196 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CNTNAP5Q8WYK1 1306 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 DOCK4Q8N1I0 1966 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1B0GWB2 263 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CEBPZOSA8MTT3 80 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 M0R082 166 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CTDSPLO15194 276 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 RELBQ01201 579 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAB40BQ12829 278 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TEX44Q53QW1 395 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 APOBEC3HQ6NTF7 200 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRELID2Q8N945 189 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR9A2Q8NGT5 310 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPSB1Q96BD6 273 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TXNDC17Q9BRA2 123 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A087WV62 115 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 M0R3E3 92 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SCO2O43819 266 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MBPP02686 304 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SEC11BP0C7V7 166 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 EIF1P41567 113 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLDN8P56748 225 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 INSM1Q01101 510 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MRPL49Q13405 166 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRSS35Q8N3Z0 413 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 NTNG2Q96CW9 530 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 YIPF6Q96EC8 236 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 HSD17B14Q9BPX1 270 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MAGT1Q9H0U3 335 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 C12orf49Q9H741 205 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SIX2Q9NPC8 291 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MSRAQ9UJ68 235 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2T8A6NH00 312 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 FZD9O00144 591 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PAGE4O60829 102 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TACR1P25103 407 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MTCP1P56278 107 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TIMM23BQ5SRD1 257 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TSPO2Q5TGU0 170 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PNPLA1Q8N8W4 532 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 RDH5Q92781 318 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 GPR137Q96N19 417 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLEKHF2Q9H8W4 249 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 RCL1Q9Y2P8 373 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1W2PQM1 296 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MEX3AA1L020 520 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FCN1O00602 326 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR2DS4P43632 304 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM110CQ1W6H9 321 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF506Q5JVG8 444 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM72AQ5TYM5 149 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 Q6ZRG5 221 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 CPEB2Q7Z5Q1 589 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLA2G15Q8NCC3 412 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4K14Q8NGD5 310 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR10V1Q8NGI7 309 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR10G8Q8NGN5 311 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC5A5Q92911 643 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NTNG1Q9Y2I2 539 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FGF10O15520 208 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 POU3F3P20264 500 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 COX5AP20674 150 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCL3P20749 454 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDKN1BP46527 198 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LAIR1Q6GTX8 287 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 F2RL3Q96RI0 385 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAB6CQ9H0N0 254 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NMUR1Q9HB89 426 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 VAX2Q9UIW0 290 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC38A8A6NNN8 435 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SDCBPO00560 298 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ICAM2P13598 275 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LCN2P80188 198 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MRPL58Q14197 206 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LRRC26Q2I0M4 334 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ESAMQ96AP7 390 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 C16orf70Q9BSU1 422 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms