RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR3A4PP47883 348 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 DHRS2Q13268 280 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.35
TPM3-206ENST00000330188 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 TOR2AQ5JU69 321 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 ZNF468Q5VIY5 522 aaPredicted RBP12.83□□□□□ -0.35
TPM3-206ENST00000330188 TMUB2Q71RG4 321 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 TMEM123Q8N131 208 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 TMEM104Q8NE00 496 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 OR9K2Q8NGE7 335 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 OR14K1Q8NGZ2 314 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.35
TPM3-206ENST00000330188 PRRT1Q99946 306 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 GSX2Q9BZM3 304 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 COL27A1Q8IZC6 1860 aaPredicted RBP12.83□□□□□ -0.36
TPM3-206ENST00000330188 A0A0J9YW62 118 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 NPIPA2E9PIF3 369 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 NPIPA3F8WFD2 350 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 CASRP41180 1078 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 CXADRP78310 365 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 RIPPLY1Q0D2K3 151 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 DTWD2Q8NBA8 298 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 STEAP2Q8NFT2 490 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 LYZL4Q96KX0 146 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 NAA11Q9BSU3 229 aaPredicted RBP12.83□□□□□ -0.36
TPM3-206ENST00000330188 IFT46Q9NQC8 304 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 KCNK7Q9Y2U2 307 aa12.83□□□□□ -0.36
TPM3-206ENST00000330188 IGKV1-9A0A0C4DH69 117 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 TUBAL3A6NHL2 446 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CDC14BO60729 498 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CHRM2P08172 466 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 HCKP08631 526 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 HRH1P35367 487 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CD96P40200 585 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 RAB14P61106 215 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
TPM3-206ENST00000330188 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 SFRP5Q5T4F7 317 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 NAA40Q86UY6 237 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 TMEM41AQ96HV5 264 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 KCNN3Q9UGI6 736 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 DMDP11532 3685 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 OR5H15A6NDH6 313 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 TNFSF11O14788 317 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CBR3O75828 277 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 MPIG6BO95866 241 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 PPP3CBP16298 524 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 GUCA1AP43080 201 aaPredicted RBP12.82□□□□□ -0.36
TPM3-206ENST00000330188 RAC1P63000 192 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 SORDQ00796 357 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 CLVS2Q5SYC1 327 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 SLC23A3Q6PIS1 610 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 SLC25A42Q86VD7 318 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 ZDHHC22Q8N966 263 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 ZIC4Q8N9L1 334 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 KCNG3Q8TAE7 436 aa12.82□□□□□ -0.36
TPM3-206ENST00000330188 FOXD3Q9UJU5 478 aaPredicted RBP12.82□□□□□ -0.36
TPM3-206ENST00000330188 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 A0A1W2PP11 408 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 RFPL4AA6NLU0 287 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 RFPL4AL1F8VTS6 287 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 DHHO43323 396 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 RP2O75695 350 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 RRASP10301 218 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 LIPCP11150 499 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 CD34P28906 385 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 GMFBP60983 142 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 HIST1H3AP68431 136 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 ZXDAP98168 799 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 HIST2H3PS2Q5TEC6 136 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 HIST2H3AQ71DI3 136 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 LRRC18Q8N456 261 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 LIN37Q96GY3 246 aaPredicted RBP12.81□□□□□ -0.36
TPM3-206ENST00000330188 PIGQQ9BRB3 760 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 BANF2Q9H503 90 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 ANAPC10Q9UM13 185 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 VPS13AQ96RL7 3174 aa12.81□□□□□ -0.36
TPM3-206ENST00000330188 NCKAP5O14513 1909 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 LOC100509620A0A075B734 347 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 SOCS1O15524 211 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 STK17BO94768 372 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 HLA-AP01891 365 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 ZBTB25P24278 435 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 SUCLG1P53597 346 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 TMEM50BP56557 158 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms