RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 HLA-DPB1P04440 258 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CD8BP10966 210 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PSG4Q00888 419 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RAB35Q15286 201 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 TBRG1Q3YBR2 411 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PABPC1L2AQ5JQF8 200 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RSBN1Q5VWQ0 802 aaPredicted RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF680Q8NEM1 530 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RND1Q92730 232 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 HDHD2Q9H0R4 259 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 FRRS1LQ9P0K9 344 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 SLC22A13Q9Y226 551 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 KLF2Q9Y5W3 355 aaPredicted RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 A0A1W2PR80 420 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 NCR1O76036 304 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PNPP00491 289 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 ANXA2P07355 339 aaKnown RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 OR3A3P47888 321 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CX3CR1P49238 355 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 MRPL49Q13405 166 aaKnown RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 WDR38Q5JTN6 314 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 BCL2L15Q5TBC7 163 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 SYT9Q86SS6 491 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CXorf67Q86X51 503 aaPredicted RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 BCL2L2Q92843 193 aaPredicted RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 SLC30A2Q9BRI3 323 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 NIPAL2Q9H841 368 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PNRC2Q9NPJ4 139 aaKnown RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 TBC1D24Q9ULP9 559 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 ARHGAP21Q5T5U3 1957 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 FAM25AB3EWG3 89 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 FAM25CB3EWG5 89 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 FAM25GB3EWG6 89 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 E9PLN8 166 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CCL21O00585 134 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 ZFPL1O95159 310 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CGAP01215 116 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RAB1AP62820 205 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PLP2Q04941 152 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 COMMD2Q86X83 199 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RDH10Q8IZV5 341 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF433Q8N7K0 673 aaPredicted RBP8.76□□□□□ -1.01
HMGB3-201ENST00000325307 CELF2-AS1Q8N7Q2 184 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 OR1F12Q8NHA8 337 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 SETD6Q8TBK2 473 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PPP1R14AQ96A00 147 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 PGLYRP3Q96LB9 341 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 C4orf45Q96LM5 186 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 KCTD7Q96MP8 289 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 VKORC1Q9BQB6 163 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 TMEM246Q9BRR3 403 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 C14orf119Q9NWQ9 140 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 OR52A1Q9UKL2 312 aa8.76□□□□□ -1.01
HMGB3-201ENST00000325307 RGS9O75916 674 aaPredicted RBP8.75□□□□□ -1.01
HMGB3-201ENST00000325307 DBHP09172 617 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 CCNOP22674 350 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 POU3F4P49335 361 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 RHOUQ7L0Q8 258 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF627Q7L945 461 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 GABRG1Q8N1C3 465 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 PRSS35Q8N3Z0 413 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 MS4A15Q8N5U1 240 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 POC5Q8NA72 575 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 DACT3Q96B18 629 aaPredicted RBP8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ABCB9Q9NP78 766 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 POLEQ07864 2286 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 RTTNQ86VV8 2226 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 TMEM212A6NML5 194 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 SC5DO75845 299 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 UBL3O95164 117 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ARR3P36575 388 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 CA7P43166 264 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF121P58317 390 aaPredicted RBP8.75□□□□□ -1.01
HMGB3-201ENST00000325307 HIST1H3AP68431 136 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ECH1Q13011 328 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 P2RY6Q15077 328 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 GSG1Q2KHT4 349 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 HIST2H3PS2Q5TEC6 136 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 HIST2H3AQ71DI3 136 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 CMTM3Q96MX0 182 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 KCNJ15Q99712 375 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 GAL3ST1Q99999 423 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 DDX28Q9NUL7 540 aaKnown RBP8.75□□□□□ -1.01
HMGB3-201ENST00000325307 GSTK1Q9Y2Q3 226 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF281Q9Y2X9 895 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 MEMO1Q9Y316 297 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 PCNX1Q96RV3 2341 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 EPG5Q9HCE0 2579 aa8.75□□□□□ -1.01
HMGB3-201ENST00000325307 HMX3A6NHT5 357 aa8.74□□□□□ -1.01
HMGB3-201ENST00000325307 M0R135 149 aa8.74□□□□□ -1.01
HMGB3-201ENST00000325307 GPRIN2O60269 458 aa8.74□□□□□ -1.01
HMGB3-201ENST00000325307 MMP7P09237 267 aaPredicted RBP8.74□□□□□ -1.01
HMGB3-201ENST00000325307 KIR3DL2P43630 455 aa8.74□□□□□ -1.01
HMGB3-201ENST00000325307 PSMA6P60900 246 aaKnown RBP8.74□□□□□ -1.01
HMGB3-201ENST00000325307 TRAM1Q15629 374 aa8.74□□□□□ -1.01
HMGB3-201ENST00000325307 BAK1Q16611 211 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms