RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 PHYHD1Q5SRE7 291 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 ZNF660Q6AZW8 331 aaPredicted RBP12.16□□□□□ -0.46
ATG4C-201ENST00000317868 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 CHMP1BQ7LBR1 199 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 ABHD12BQ7Z5M8 362 aaPredicted RBP12.16□□□□□ -0.46
ATG4C-201ENST00000317868 UBALD2Q8IYN6 164 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
ATG4C-201ENST00000317868 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATG4C-201ENST00000317868 HS3ST3B1Q9Y662 390 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 KCNMB2Q9Y691 235 aa12.16□□□□□ -0.46
ATG4C-201ENST00000317868 FXYD6-FXYD2A0A087WZ82 144 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 IGKV1-9A0A0C4DH69 117 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 I3L521 148 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 SULT2B1O00204 365 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 CDC14BO60729 498 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 LIFP15018 202 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ZNF20P17024 532 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 GMFBP60983 142 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ENDOGQ14249 297 aaKnown RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 CARD17Q5XLA6 110 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 OPN5Q6U736 354 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 LYZL4Q96KX0 146 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ZNF230Q9UIE0 474 aaPredicted RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 DBX1A6NMT0 343 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ZIC3O60481 467 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 NKD1Q969G9 470 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ZNF416Q9BWM5 594 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 CST11Q9H112 138 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 FOXD3Q9UJU5 478 aaPredicted RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
ATG4C-201ENST00000317868 V9GYS6 101 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 DMDP11532 3685 aa12.15□□□□□ -0.46
ATG4C-201ENST00000317868 OR2AT4A6NND4 320 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CCL3P10147 92 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 NR2C1P13056 603 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 PRF1P14222 555 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CD34P28906 385 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 HRH1P35367 487 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 OR3A4PP47883 348 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 DSCR4P56555 118 aaPredicted RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 TMEM50BP56557 158 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CLDN17P56750 224 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 HOGA1Q86XE5 327 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 DMRTA2Q96SC8 542 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 POLR1DQ9Y2S0 133 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 MFNGO00587 321 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 STK17BO94768 372 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 SLC2A1P11166 492 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 PRKXP51817 358 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CXADRP78310 365 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 MC2RQ01718 297 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 FGL1Q08830 312 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 RSPO1Q2MKA7 263 aaPredicted RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 SCGB2B2Q4G0G5 96 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 DTX1Q86Y01 620 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 CXorf58Q96LI9 332 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 ZNF726A6NNF4 738 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 HIST1H1DP16402 221 aaKnown RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 MSR1P21757 451 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 AGTR1P30556 359 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 ARPC4P59998 168 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 NKPD1Q17RQ9 610 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 VAX1Q5SQQ9 334 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 KCNG3Q8TAE7 436 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
ATG4C-201ENST00000317868 SELENOIQ9C0D9 397 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 MFFQ9GZY8 342 aa12.14□□□□□ -0.47
ATG4C-201ENST00000317868 OR5H14A6NHG9 310 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms