RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 A6NJ64 397 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 C9J4A7 227 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SIGLEC6O43699 453 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 NUDT21O43809 227 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ATG12O94817 140 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 S100A6P06703 90 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 GUSBP08236 651 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 CDAP32320 146 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ROM1Q03395 351 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 TEX30Q5JUR7 227 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 EIF5AL1Q6IS14 154 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 FAM57BQ71RH2 274 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 UEVLDQ8IX04 471 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 DDIT4LQ96D03 193 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 OR5B2Q96R09 309 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 CDC6Q99741 560 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 NICN1Q9BSH3 213 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 PARP12Q9H0J9 701 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SERINC1Q9NRX5 453 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 WNT16Q9UBV4 365 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 IGHV1OR21-1A0A087WYE8 117 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 NME2P22392 152 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 RBMXP38159 391 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 NXPH1P58417 271 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 TAS2R31P59538 309 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 STK11Q15831 433 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 HLA-BQ31612 363 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 FNDC7Q5VTL7 733 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 TMEM200AQ86VY9 491 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 PPP1R3BQ86XI6 285 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ESX1Q8N693 406 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF775Q96BV0 537 aaPredicted RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 PTRH2Q9Y3E5 179 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 RHBDD3Q9Y3P4 386 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 JMJD7P0C870 316 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SERPINA2P20848 420 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 PNLIPRP2P54317 469 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 GUCA2BQ16661 112 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SLC26A10Q8NG04 563 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 STT3BQ8TCJ2 826 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF721Q8TF20 911 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 MITD1Q8WV92 249 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 C14orf166Q9Y224 244 aaKnown RBP9.37□□□□□ -0.91
COL3A1-202ENST00000317840 KCNK7Q9Y2U2 307 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 MEMO1Q9Y316 297 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 SZT2Q5T011 3432 aa9.37□□□□□ -0.91
COL3A1-202ENST00000317840 TRBV11-1A0A0K0K1C0 115 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 A0A1B0GV50 99 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 A0A1W2PNR3 127 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 DDAH2O95865 285 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ITGA3P26006 1051 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 CALCRP30988 508 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 CCL7P80098 99 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 FLI1Q01543 452 aaPredicted RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 TERB2Q8NHR7 220 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ROBO4Q8WZ75 1007 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 PGAM5Q96HS1 289 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 GPR84Q9NQS5 396 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 LANCL2Q9NS86 450 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 FAM96BQ9Y3D0 163 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 VCANP13611 3396 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 MED6O75586 246 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 SCGNO76038 276 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 CRHP06850 196 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 GLB1P16278 677 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ZBTB25P24278 435 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ACY1Q03154 408 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ASPHD2Q6ICH7 369 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 OR1N1Q8NGS0 311 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 KCNG3Q8TAE7 436 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ADIPOR1Q96A54 375 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 VN1R1Q9GZP7 353 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ALKBH4Q9NXW9 302 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 SLC5A6Q9Y289 635 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 A0A1W2PP11 408 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 TRAPPC6AO75865 159 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 SNAPINO95295 136 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 PRH1P02810 166 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF43P17038 809 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 EIF5AP63241 154 aaKnown RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 C17orf67Q0P5P2 114 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 NKAIN1Q4KMZ8 207 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 MOB3CQ70IA8 216 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 PUSL1Q8N0Z8 303 aaKnown RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 OR5T2Q8NGG2 359 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF519Q8TB69 540 aa9.36□□□□□ -0.91
COL3A1-202ENST00000317840 LSM5Q9Y4Y9 91 aaKnown RBP9.36□□□□□ -0.91
COL3A1-202ENST00000317840 PHF3Q92576 2039 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms