RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 NPBWR1P48145 328 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 NSDHLQ15738 373 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 ADAMTS17Q8TE56 1095 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 ROBO4Q8WZ75 1007 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 SMIM8Q96KF7 97 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 CHST11Q9NPF2 352 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 FANCFQ9NPI8 374 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 ZFP57Q9NU63 452 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 MED29Q9NX70 200 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 PISDQ9UG56 409 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 ANKUB1A6NFN9 424 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 FPR2P25090 351 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 POU3F1Q03052 451 aaPredicted RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 C17orf82Q86X59 251 aaPredicted RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 OR5AS1Q8N127 324 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 OR10H5Q8NGA6 315 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 OCSTAMPQ9BR26 566 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 RAB33BQ9H082 229 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 ESRP2Q9H6T0 727 aaKnown RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 MOB1AQ9H8S9 216 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 TREM1Q9NP99 234 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 BIN3Q9NQY0 253 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 COA4Q9NYJ1 87 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 OR5AC2Q9NZP5 309 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 DHCR7Q9UBM7 475 aaKnown RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 KNL1Q8NG31 2342 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 RPL35P42766 123 aaKnown RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 B2MP61769 119 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 SUPT4H1P63272 117 aaKnown RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 ZNF585AQ6P3V2 769 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 GLIPR1L1Q6UWM5 242 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 RNF144BQ7Z419 303 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 LHFPL1Q86WI0 220 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 ZNF101Q8IZC7 436 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 TMEM104Q8NE00 496 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 ZNF775Q96BV0 537 aaPredicted RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 RAB3CQ96E17 227 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 SCGB3A2Q96PL1 93 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 NRIP2Q9BQI9 281 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 TMEM106CQ9BVX2 250 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 DNAJB11Q9UBS4 358 aa16.93■□□□□ 0.3
RTN4-201ENST00000317610 MRPS28Q9Y2Q9 187 aaKnown RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 ARID1BQ8NFD5 2236 aaPredicted RBP16.93■□□□□ 0.3
RTN4-201ENST00000317610 ZNF705EA8MWA4 302 aaPredicted RBP16.92■□□□□ 0.3
RTN4-201ENST00000317610 SOCS1O15524 211 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 CDC14BO60729 498 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 ADAP1O75689 374 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 NPY4RP50391 375 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 IL15RAQ13261 267 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 KCNG3Q8TAE7 436 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 RTBDNQ9BSG5 229 aaPredicted RBP16.92■□□□□ 0.3
RTN4-201ENST00000317610 SLC5A7Q9GZV3 580 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 CLEC1BQ9P126 229 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 RCC2Q9P258 522 aaKnown RBP16.92■□□□□ 0.3
RTN4-201ENST00000317610 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 F12P00748 615 aaPredicted RBP16.92■□□□□ 0.3
RTN4-201ENST00000317610 ZNF20P17024 532 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 BCKDHBP21953 392 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 APOBEC1P41238 236 aaKnown RBP16.92■□□□□ 0.3
RTN4-201ENST00000317610 TMEM50BP56557 158 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 TLE3Q04726 772 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 SLC9A3R2Q15599 337 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 ANKRD55Q3KP44 614 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 GKN2Q86XP6 184 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 POC1AQ8NBT0 407 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 BHLHE23Q8NDY6 225 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 GLYATL2Q8WU03 294 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 ZDHHC12Q96GR4 267 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 SLC26A1Q9H2B4 701 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 TMEM231Q9H6L2 316 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
RTN4-201ENST00000317610 MFNGO00587 321 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 RAD51DO75771 328 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 MPIG6BO95866 241 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 CSTBP04080 98 aaKnown RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 HOXB1P14653 301 aaPredicted RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 PPM1FP49593 454 aaPredicted RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 CAV2P51636 162 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 AKR1D1P51857 326 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 TMPRSS9Q7Z410 1059 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 OR51E1Q8TCB6 317 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 C2orf50Q96LR7 162 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 ZNF768Q9H5H4 540 aaKnown RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 RHOFQ9HBH0 211 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 EXPH5Q8NEV8 1989 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 MBTPS2O43462 519 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 NME1P15531 152 aaKnown RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 MUC1P15941 1255 aaPredicted RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 FBLP22087 321 aaKnown RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 LAP3P28838 519 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 GFOD2Q3B7J2 385 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 NSUN5P2Q63ZY6 315 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 Q7L0L9 218 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 C12orf57Q99622 126 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 MRPL13Q9BYD1 178 aaKnown RBP16.91■□□□□ 0.3
RTN4-201ENST00000317610 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 WIF1Q9Y5W5 379 aa16.91■□□□□ 0.3
RTN4-201ENST00000317610 A0A1W2PNV4 684 aa16.9■□□□□ 0.3
RTN4-201ENST00000317610 CBX5P45973 191 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms