RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ADAT1Q9BUB4 502 aaKnown RBP14.86□□□□□ -0.03
TPM1-203ENST00000317516 ZNF556Q9HAH1 456 aa14.86□□□□□ -0.03
TPM1-203ENST00000317516 TRIM36Q9NQ86 728 aa14.86□□□□□ -0.03
TPM1-203ENST00000317516 UFSP2Q9NUQ7 469 aa14.86□□□□□ -0.03
TPM1-203ENST00000317516 RNF7Q9UBF6 113 aa14.86□□□□□ -0.03
TPM1-203ENST00000317516 CLN8Q9UBY8 286 aa14.86□□□□□ -0.03
TPM1-203ENST00000317516 DHRS12A0PJE2 317 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 ACOT8O14734 319 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 FAM20BO75063 409 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 CLUP10909 449 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 GSTT1P30711 240 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 CD80P33681 288 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 EIF2B1Q14232 305 aaKnown RBP14.85□□□□□ -0.03
TPM1-203ENST00000317516 FAM201AQ5SY85 155 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 PRAMEF6Q5VXH4 476 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 RHOUQ7L0Q8 258 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 CLPTM1LQ96KA5 538 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 MS4A7Q9GZW8 240 aaPredicted RBP14.85□□□□□ -0.03
TPM1-203ENST00000317516 YY1AP1Q9H869 796 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 C14orf119Q9NWQ9 140 aa14.85□□□□□ -0.03
TPM1-203ENST00000317516 TANC2Q9HCD6 1990 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 IGHV2-70DA0A0C4DH43 119 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 KIR2DS1A0A191URI9 304 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 ANKRD30BLA7E2S9 258 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 PHYHO14832 338 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 TBX1O43435 398 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 NDUFA2O43678 99 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 GLCEO94923 617 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 PTBP3O95758 552 aaKnown RBP14.84□□□□□ -0.03
TPM1-203ENST00000317516 ANXA2P07355 339 aaKnown RBP14.84□□□□□ -0.03
TPM1-203ENST00000317516 SLC2A1P11166 492 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 CFL1P23528 166 aaKnown RBP14.84□□□□□ -0.03
TPM1-203ENST00000317516 POU1F1P28069 291 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 NPY4RP50391 375 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 MPPED2Q15777 294 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 LINC01590Q5TEZ4 76 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 SPATC1Q76KD6 591 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 DPY19L4Q7Z388 723 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 ERI1Q8IV48 349 aaKnown RBP14.84□□□□□ -0.03
TPM1-203ENST00000317516 ADGRG5Q8IZF4 528 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 C3orf56Q8N813 242 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 ZDHHC22Q8N966 263 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 OR6N2Q8NGY6 317 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 CANT1Q8WVQ1 401 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 TEX12Q9BXU0 123 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 PDP1Q9P0J1 537 aaPredicted RBP14.84□□□□□ -0.03
TPM1-203ENST00000317516 ZNF69Q9UC07 566 aa14.84□□□□□ -0.03
TPM1-203ENST00000317516 TRAV38-1A0A0B4J264 116 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 FAM183AA6NL82 134 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 LGALS8O00214 317 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 DYNC1I1O14576 645 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 GYG2O15488 501 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 E2F6O75461 281 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 HMGN1P05114 100 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 PSKH1P11801 424 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 CFPP27918 469 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 MTNR1AP48039 350 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 CX3CR1P49238 355 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 UBA52P62987 128 aaKnown RBP14.83□□□□□ -0.04
TPM1-203ENST00000317516 PAX2Q02962 417 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 TIGD6Q17RP2 521 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 DNAL1Q4LDG9 190 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 KLF17Q5JT82 389 aaPredicted RBP14.83□□□□□ -0.04
TPM1-203ENST00000317516 CD276Q5ZPR3 534 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 DOK3Q7L591 496 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 SIGLECL1Q8N7X8 197 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 OR52H1Q8NGJ2 320 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 OR8S1Q8NH09 359 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 SPSB4Q96A44 273 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 NUDT16L1Q9BRJ7 211 aaKnown RBP14.83□□□□□ -0.04
TPM1-203ENST00000317516 ABHD6Q9BV23 337 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 OR51V1Q9H2C8 321 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 ZMAT3Q9HA38 289 aaKnown RBP14.83□□□□□ -0.04
TPM1-203ENST00000317516 ERVK-18Q9QC07 812 aa14.83□□□□□ -0.04
TPM1-203ENST00000317516 A6NLC8 198 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 PRR23D1E9PI22 279 aaPredicted RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 GRPP07492 148 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 PRR23D2P0DMB1 279 aaPredicted RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 GINS1Q14691 196 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 OR8B8Q15620 311 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 SNCBQ16143 134 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 WDR25Q64LD2 544 aaPredicted RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 TRPM8Q7Z2W7 1104 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 IQCF1Q8N6M8 205 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 BOLLQ8N9W6 283 aaKnown RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 RNF133Q8WVZ7 376 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 UPRTQ96BW1 309 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 OR10A2Q9H208 303 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 MMADHCQ9H3L0 296 aaPredicted RBP14.82□□□□□ -0.04
TPM1-203ENST00000317516 MED20Q9H944 212 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 MARCH7Q9H992 704 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 ESM1Q9NQ30 184 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 C1orf123Q9NWV4 160 aa14.82□□□□□ -0.04
TPM1-203ENST00000317516 ARHGAP32A7KAX9 2087 aa14.81□□□□□ -0.04
TPM1-203ENST00000317516 C5orf63A6NC05 138 aa14.81□□□□□ -0.04
TPM1-203ENST00000317516 ENSAO43768 121 aaKnown RBP14.81□□□□□ -0.04
TPM1-203ENST00000317516 LIPFP07098 398 aa14.81□□□□□ -0.04
TPM1-203ENST00000317516 H2BFMP0C1H6 154 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms