RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CST9Q5W186 159 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TCEAL6Q6IPX3 200 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SULF2Q8IWU5 870 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR5T3Q8NGG3 340 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 FAM174AQ8TBP5 190 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GNPNAT1Q96EK6 184 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 DOCK6Q96HP0 2047 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 AMELYQ99218 206 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 NIPSNAP3BQ9BS92 247 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RAB33BQ9H082 229 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 C5orf66Q9H5L9 145 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 IGKV1D-16P01601 117 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR8U9P0C7N5 309 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF708P17019 499 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 DAP3P51398 398 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ADPRHP54922 357 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SEC13P55735 322 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SLC35A1P78382 337 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 HSD11B2P80365 405 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MIDNQ504T8 468 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 C9orf152Q5JTZ5 239 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 C1orf140Q5VVS0 124 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MED25Q71SY5 747 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MRPL43Q8N983 215 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 C16orf52Q8NHV5 167 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RAB39BQ96DA2 213 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MRPS28Q9Y2Q9 187 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SMCO3A2RU48 225 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GPR137BO60478 399 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR2C1O95371 312 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CT45A8P0DMV1 189 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CT45A9P0DMV2 189 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 FAM53BQ14153 422 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 IL13RA2Q14627 380 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CT45A2Q5DJT8 189 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GLIPR1L1Q6UWM5 242 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GRINAQ7Z429 371 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 LGI3Q8N145 548 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 FAM160A2Q8N612 972 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR51A2Q8NGJ7 313 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR10G6Q8NH81 332 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM230Q96A57 120 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ABHD14BQ96IU4 210 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR11A1Q9GZK7 315 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 LPAR5Q9H1C0 372 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 NELFAQ9H3P2 528 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PPH5 198 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PRSS38A1L453 326 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 BCAT2O15382 392 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 HCRTR1O43613 425 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PTBP3O95758 552 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 APODP05090 189 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ITGA3P26006 1051 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RPS27P42677 84 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 H3F3AP84243 136 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 NFATC4Q14934 902 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TCTN1Q2MV58 587 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GXYLT1Q4G148 440 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 COL13A1Q5TAT6 717 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RPUSD3Q6P087 351 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR4N2Q8NGD1 307 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR4D6Q8NGJ1 314 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF707Q96C28 371 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RBMXL1Q96E39 390 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GALNT14Q96FL9 552 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SSX3Q99909 188 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CHST5Q9GZS9 411 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CENPMQ9NSP4 180 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 EMC9Q9Y3B6 208 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 HDGFL3Q9Y3E1 203 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MMACHCQ9Y4U1 282 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PIKFYVEQ9Y2I7 2098 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 NSA2O95478 260 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TIMP1P01033 207 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 DDTP30046 118 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GDI1P31150 447 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 P2RY4P51582 365 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MOGAT2Q3SYC2 334 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR51F2Q8NH61 342 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MRPL38Q96DV4 380 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 C2orf88Q9BSF0 95 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TBL1XR1Q9BZK7 514 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 G6PC2Q9NQR9 355 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 HRASLS2Q9NWW9 162 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR5AC2Q9NZP5 309 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TBC1D29Q9UFV1 150 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM150CB9EJG8 249 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NPIPA5E9PKD4 350 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 HCRTR2O43614 444 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 GIMD1P0DJR0 217 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 NME1P15531 152 aaKnown RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 CTLA4P16410 223 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 GPX4P36969 197 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-201ENST00000316707 EGR4Q05215 589 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 FOXO1Q12778 655 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 ASPHD2Q6ICH7 369 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 LRRC69Q6ZNQ3 347 aa4.25□□□□□ -1.73
PTPN13-201ENST00000316707 LRTM2Q8N967 370 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms