RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GPR6P46095 362 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 TP53I3Q53FA7 332 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 ZNF322Q6U7Q0 402 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 MOGAT3Q86VF5 341 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 OR10H4Q8NGA5 316 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 OR5L1Q8NGL2 311 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 PGAM5Q96HS1 289 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 MEGF10Q96KG7 1140 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 TEX12Q9BXU0 123 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 YIPF3Q9GZM5 350 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 GCM1Q9NP62 436 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 YAE1D1Q9NRH1 226 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 IMPAD1Q9NX62 359 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 GPR160Q9UJ42 338 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 RHBDD3Q9Y3P4 386 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 hCG_38984A0A1B0GV85 526 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 GGT3PA6NGU5 568 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 TFF1P04155 84 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 ERCC1P07992 297 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 SLC25A16P16260 332 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 ACHEP22303 614 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 SLC15A1P46059 708 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 RAD23AP54725 363 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 CDC42P60953 191 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 GRB2P62993 217 aaKnown RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 UNQ6126/PRO20091Q6UXV3 157 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 RDH10Q8IZV5 341 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 SPRYD4Q8WW59 207 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 RNFT2Q96EX2 444 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 UBAP1Q9NZ09 502 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 TMEM269A0A1B0GVZ9 245 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 SLC22A31A6NKX4 558 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 WBP4O75554 376 aaKnown RBP10.15□□□□□ -0.78
SCFD1-201ENST00000311943 GSK3AP49840 483 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 MMP16P51512 607 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 LMO4P61968 165 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 CSNK2BP67870 215 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 MALLQ13021 153 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 TIGD6Q17RP2 521 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 LAIR2Q6ISS4 152 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 OR51E1Q8TCB6 317 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 FAM71F1Q96KD3 344 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-201ENST00000311943 TMEM100Q9NV29 134 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 NKIRAS2Q9NYR9 191 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 TANC2Q9HCD6 1990 aa10.15□□□□□ -0.78
SCFD1-201ENST00000311943 ISPDA4D126 451 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 TTRP02766 147 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 GRPP07492 148 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 CD55P08174 381 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ADH4P08319 380 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 TACSTD2P09758 323 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 DSCR9P59020 149 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 PSMA6P60900 246 aaKnown RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF91Q05481 1191 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 DOC2BQ14184 412 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 HFEQ30201 348 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 FAM209AQ5JX71 171 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 C6orf52Q5T4I8 152 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 SFRP4Q6FHJ7 346 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 LHFPL3Q86UP9 236 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF679Q8IYX0 411 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 RHOXF1Q8NHV9 184 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 CYGBQ8WWM9 190 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 PBOV1Q9GZY1 135 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ISG20L2Q9H9L3 353 aaKnown RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 G6PC2Q9NQR9 355 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 CLN6Q9NWW5 311 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 SMPD3Q9NY59 655 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZDHHC8Q9ULC8 765 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 PPP1R3CQ9UQK1 317 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ORC6Q9Y5N6 252 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 J3QRE1 110 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 NDUFS8O00217 210 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 TGFAP01135 160 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 OR12D2P58182 307 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 GMFBP60983 142 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ROM1Q03395 351 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZMYND11Q15326 602 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 PCGF3Q3KNV8 242 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 LCN1P1Q5VSP4 162 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 LIPNQ5VXI9 398 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 GID4Q8IVV7 300 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 BATF2Q8N1L9 274 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 BOLLQ8N9W6 283 aaKnown RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 RORBQ92753 470 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 LGALS12Q96DT0 336 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF649Q9BS31 505 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 ADAT1Q9BUB4 502 aaKnown RBP10.14□□□□□ -0.79
SCFD1-201ENST00000311943 MROQ9BYG7 248 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms