RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PTTG3PQ9NZH4 202 aa15.65■□□□□ 0.1
HMGA1-201ENST00000311487 A3GALT2U3KPV4 340 aa15.65■□□□□ 0.1
HMGA1-201ENST00000311487 CSMD1Q96PZ7 3565 aa15.65■□□□□ 0.1
HMGA1-201ENST00000311487 OTX1P32242 354 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-201ENST00000311487 THBS4P35443 961 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 ALKBH6Q3KRA9 238 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 C16orf87Q6PH81 154 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 ZNF704Q6ZNC4 412 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-201ENST00000311487 TMEM200AQ86VY9 491 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 LRP11Q86VZ4 500 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 PRSS35Q8N3Z0 413 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 KLHL36Q8N4N3 616 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 FAM206AQ9NX38 181 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 KCNN3Q9UGI6 736 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 E7EQL1 145 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 TPBGQ13641 420 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 SLC25A40Q8TBP6 338 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 AKAP1Q92667 903 aaKnown RBP eCLIP15.64■□□□□ 0.097e-12■■■■□ 24.8
HMGA1-201ENST00000311487 NRGNQ92686 78 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 PGAM5Q96HS1 289 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 INPP5EQ9NRR6 644 aa15.64■□□□□ 0.09
HMGA1-201ENST00000311487 SIRT4Q9Y6E7 314 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-201ENST00000311487 ABCA12Q86UK0 2595 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 LOC110117498-PIK3R3F6TDL0 507 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 SRSF10O75494 262 aaKnown RBP15.63■□□□□ 0.09
HMGA1-201ENST00000311487 CTAG2O75638 210 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 SULT1C4O75897 302 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 MPV17P39210 176 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 RANBP1P43487 201 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 PPP1CBP62140 327 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 ACTA2P62736 377 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 ACTG2P63267 376 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 DAZAP2Q15038 168 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-201ENST00000311487 GLYATL3Q5SZD4 288 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 TMPRSS11AQ6ZMR5 421 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 PRSS45Q7RTY3 260 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 OR8B12Q8NGG6 310 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 MARVELD3Q96A59 401 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 SYT3Q9BQG1 590 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 PBOV1Q9GZY1 135 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 CLEC4MQ9H2X3 399 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-201ENST00000311487 CA10Q9NS85 328 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 CISD1Q9NZ45 108 aaKnown RBP15.63■□□□□ 0.09
HMGA1-201ENST00000311487 DUSP13Q9UII6 198 aa15.63■□□□□ 0.09
HMGA1-201ENST00000311487 A6NIN4 97 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 ZNF254O75437 659 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 PRF1P14222 555 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 PSMA6P60900 246 aaKnown RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 ZNF92Q03936 586 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 TLE4Q04727 773 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 C3orf36Q3SXR2 165 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 TMEM255AQ5JRV8 349 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 WDR38Q5JTN6 314 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 DRAM2Q6UX65 266 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 SSX8Q7RTT4 187 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 COMMD2Q86X83 199 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 IL17RDQ8NFM7 739 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 OR52N1Q8NH53 320 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 UFD1Q92890 307 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 C1QTNF5Q9BXJ0 243 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 UBTD1Q9HAC8 227 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 MOV10Q9HCE1 1003 aaKnown RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 G6PC2Q9NQR9 355 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 FRRS1LQ9P0K9 344 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 SSR3Q9UNL2 185 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 CAB39Q9Y376 341 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 SF3B6Q9Y3B4 125 aaKnown RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 R4GMQ9 66 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 SPG11Q96JI7 2443 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 MT-ND5P03915 603 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 TACSTD2P09758 323 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 RAD52P43351 418 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 RPS25P62851 125 aaKnown RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 NKX6-1P78426 367 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 DMRTC1Q5HYR2 192 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 DEGS2Q6QHC5 323 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 RHOUQ7L0Q8 258 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 BHLHE23Q8NDY6 225 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 SGK3Q96BR1 496 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 MYEF2Q9P2K5 600 aaKnown RBP15.62■□□□□ 0.09
HMGA1-201ENST00000311487 OR52A1Q9UKL2 312 aa15.62■□□□□ 0.09
HMGA1-201ENST00000311487 P2RY10O00398 339 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 MAGEB1P43366 347 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 KIR3DL2P43630 455 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 KRTAP10-9P60411 292 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 ACSM1Q08AH1 577 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 BCL2L15Q5TBC7 163 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 ARL9Q6T311 187 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 OR51E1Q8TCB6 317 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 TMEM171Q8WVE6 324 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 APOBEC3DQ96AK3 386 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-201ENST00000311487 PDCD1LG2Q9BQ51 273 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 C6orf62Q9GZU0 229 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-201ENST00000311487 LIME1Q9H400 295 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 TXNL4BQ9NX01 149 aaKnown RBP15.61■□□□□ 0.09
HMGA1-201ENST00000311487 BABAM2Q9NXR7 383 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 ATPIF1Q9UII2 106 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 POLQO75417 2590 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 BAHCC1Q9P281 2608 aa15.61■□□□□ 0.09
HMGA1-201ENST00000311487 OR4A8P0C604 315 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms