RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 LSM2Q9Y333 95 aaKnown RBP14.09□□□□□ -0.15
HCFC1-201ENST00000310441 DEDDO75618 318 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 GPM6AP51674 278 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 NHLH1Q02575 133 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 NHLH2Q02577 135 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 TM4SF18Q96CE8 201 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 CREBZFQ9NS37 354 aa14.09□□□□□ -0.15
HCFC1-201ENST00000310441 CRISP2P16562 243 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 GABRB1P18505 474 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 MMP15P51511 669 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 HLXQ14774 488 aaPredicted RBP14.08□□□□□ -0.15
HCFC1-201ENST00000310441 SLAMF6Q96DU3 332 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 NPAS1Q99742 590 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 IFITM5A6NNB3 132 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 TNFRSF10CO14798 259 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 COX19Q49B96 90 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 C1orf220Q5T0J3 134 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 TMEM268Q5VZI3 342 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 CPEB2Q7Z5Q1 589 aaKnown RBP14.08□□□□□ -0.15
HCFC1-201ENST00000310441 OR4F17Q8NGA8 305 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 OR1L1Q8NH94 360 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 NTNG2Q96CW9 530 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 LAT2Q9GZY6 243 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 ESRP2Q9H6T0 727 aaKnown RBP14.08□□□□□ -0.15
HCFC1-201ENST00000310441 ZNF835Q9Y2P0 537 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 SIT1Q9Y3P8 196 aa14.08□□□□□ -0.15
HCFC1-201ENST00000310441 A0A1W2PN81 502 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 LRP3O75074 770 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 IL2RAP01589 272 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 HNF1AP20823 631 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CHRNA7P36544 502 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 LIM2P55344 173 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 ARRDC1Q8N5I2 433 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CHST6Q9GZX3 395 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 RBBP6Q7Z6E9 1792 aaKnown RBP14.08□□□□□ -0.16
HCFC1-201ENST00000310441 SIAH2O43255 324 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CA3P07451 260 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 FGF2P09038 288 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 FZD2Q14332 565 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 PAAF1Q9BRP4 392 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 PROCRQ9UNN8 238 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 SLC25A4P12235 298 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 EDN3P14138 238 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 RPEL1Q2QD12 228 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 Q6ZNX1 250 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 UBALD1Q8TB05 177 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 TMEM147Q9BVK8 224 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CXorf36Q9H7Y0 433 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 SLAMF8Q9P0V8 285 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 MPDZO75970 2070 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 MBLAC1A4D2B0 266 aaPredicted RBP14.08□□□□□ -0.16
HCFC1-201ENST00000310441 PVRP15151 417 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 BMP5P22003 454 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 ELOBQ15370 118 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CADP27708 2225 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 C5orf49A4QMS7 147 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CRYAAP02489 173 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 OR4E1P0C645 316 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 GALR1P47211 349 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 ERV3-1Q14264 604 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 SCD5Q86SK9 330 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 MORN4Q8NDC4 146 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 PFN4Q8NHR9 129 aa14.08□□□□□ -0.16
HCFC1-201ENST00000310441 CST2P09228 141 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 FUT6P51993 359 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 EMP3P54852 163 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 ABHD17CQ6PCB6 329 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 FGF21Q9NSA1 209 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 A0A087WV62 115 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 TMEM81Q6P7N7 255 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 LCN15Q6UWW0 184 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 TMED6Q8WW62 240 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 COPS9Q8WXC6 57 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 MRGPRX4Q96LA9 322 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 HDGFL3Q9Y3E1 203 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 FAM26DQ5JW98 314 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 VASH2Q86V25 355 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 LILRA2Q8N149 483 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 MRPL43Q8N983 215 aaKnown RBP14.07□□□□□ -0.16
HCFC1-201ENST00000310441 AQP8O94778 261 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 TNFRSF1AP19438 455 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 OXGR1Q96P68 337 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 A6NDN8 102 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 NME1P15531 152 aaKnown RBP14.07□□□□□ -0.16
HCFC1-201ENST00000310441 TRIM61Q5EBN2 209 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 RHOUQ7L0Q8 258 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 ARIH2OSQ8N7S6 290 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 SLC26A10Q8NG04 563 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 OR5D13Q8NGL4 314 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 ATG101Q9BSB4 218 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 MANBALQ9NQG1 85 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 CYBAP13498 195 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 METRNLQ641Q3 311 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
HCFC1-201ENST00000310441 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms