RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 DUX5Q96PT3 197 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 MS4A7Q9GZW8 240 aaPredicted RBP16.31■□□□□ 0.2
LIME1-201ENST00000309546 MMADHCQ9H3L0 296 aaPredicted RBP16.31■□□□□ 0.2
LIME1-201ENST00000309546 FN3KRPQ9HA64 309 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 CLN8Q9UBY8 286 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 DHRS12A0PJE2 317 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 A6NLC8 198 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 GNGT2O14610 69 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 GMDSO60547 372 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 ANXA2P07355 339 aaKnown RBP16.3■□□□□ 0.2
LIME1-201ENST00000309546 HSD11B1P28845 292 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 CX3CR1P49238 355 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 BLVRAP53004 296 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 GRB2P62993 217 aaKnown RBP16.3■□□□□ 0.2
LIME1-201ENST00000309546 PCK2Q16822 640 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 LINC01590Q5TEZ4 76 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 SFRP4Q6FHJ7 346 aaPredicted RBP16.3■□□□□ 0.2
LIME1-201ENST00000309546 PARP8Q8N3A8 854 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 RAB40AQ8WXH6 277 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 INTS14Q96SY0 518 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 FEVQ99581 238 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 THTPAQ9BU02 230 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 CHID1Q9BWS9 393 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 CMC2Q9NRP2 79 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 MRPL15Q9P015 296 aaKnown RBP16.3■□□□□ 0.2
LIME1-201ENST00000309546 RNF7Q9UBF6 113 aa16.3■□□□□ 0.2
LIME1-201ENST00000309546 TRAV40A0A0B4J280 105 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 DNAJC9-AS1A6NH13 148 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 XRCC2O43543 280 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 FSTL3O95633 263 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 GRPP07492 148 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 IGHV4-38-2P0DP08 117 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 POU1F1P28069 291 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 GRK5P34947 590 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 SLC15A1P46059 708 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 COMPP49747 757 aaPredicted RBP16.29■□□□□ 0.2
LIME1-201ENST00000309546 PAX2Q02962 417 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 OR8B8Q15620 311 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 TEX30Q5JUR7 227 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 DOK3Q7L591 496 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 DPY19L4Q7Z388 723 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 ADGRG5Q8IZF4 528 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 TECTBQ96PL2 329 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 NUDT16L1Q9BRJ7 211 aaKnown RBP16.29■□□□□ 0.2
LIME1-201ENST00000309546 OPA3Q9H6K4 179 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 C1orf123Q9NWV4 160 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 TAS2R1Q9NYW7 299 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 DNAJC27Q9NZQ0 273 aa16.29■□□□□ 0.2
LIME1-201ENST00000309546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.28■□□□□ 0.2
LIME1-201ENST00000309546 hCG_1807616A0A1W2PRN6 198 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 C3orf80F5H4A9 247 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 GSTT1P30711 240 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 BAMBIQ13145 260 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 GK3PQ14409 553 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 TIGD6Q17RP2 521 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 GFOD2Q3B7J2 385 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 WDR25Q64LD2 544 aaPredicted RBP16.28■□□□□ 0.2
LIME1-201ENST00000309546 CD300LDQ6UXZ3 194 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 OR51V1Q9H2C8 321 aa16.28■□□□□ 0.2
LIME1-201ENST00000309546 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
LIME1-201ENST00000309546 ANKRD30BLA7E2S9 258 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 LGALS8O00214 317 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 ACOT8O14734 319 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 PHYHO14832 338 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 PAICSP22234 425 aaKnown RBP16.27■□□□□ 0.2
LIME1-201ENST00000309546 ZNF826PQ6ZT77 177 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 FAM57BQ71RH2 274 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 SLC16A9Q7RTY1 509 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 TMEM179BQ7Z7N9 219 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 OR8S1Q8NH09 359 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 CANT1Q8WVQ1 401 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 UPRTQ96BW1 309 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 ZNF48Q96MX3 618 aaPredicted RBP16.27■□□□□ 0.2
LIME1-201ENST00000309546 ABHD6Q9BV23 337 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 C1orf21Q9H246 121 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 TOR3AQ9H497 397 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 BRD7Q9NPI1 651 aa16.27■□□□□ 0.2
LIME1-201ENST00000309546 ARRDC5A6NEK1 342 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 E2F6O75461 281 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 GLCEO94923 617 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 PRTN3P24158 256 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 PSMB10P40306 273 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 MZT1Q08AG7 82 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 KCNJ8Q15842 424 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 AWAT1Q58HT5 328 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 SPERTQ8NA61 448 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 SPSB4Q96A44 273 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 DACT3Q96B18 629 aaPredicted RBP16.26■□□□□ 0.19
LIME1-201ENST00000309546 ZMYND19Q96E35 227 aaPredicted RBP16.26■□□□□ 0.19
LIME1-201ENST00000309546 REEP6Q96HR9 211 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 AMELYQ99218 206 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 C14orf119Q9NWQ9 140 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 CTSZQ9UBR2 303 aa16.26■□□□□ 0.19
LIME1-201ENST00000309546 SOX21Q9Y651 276 aaPredicted RBP16.26■□□□□ 0.19
LIME1-201ENST00000309546 KIR2DS1A0A191URI9 304 aa16.25■□□□□ 0.19
LIME1-201ENST00000309546 OOEPA6NGQ2 149 aa16.25■□□□□ 0.19
LIME1-201ENST00000309546 AQP12BA6NM10 295 aa16.25■□□□□ 0.19
LIME1-201ENST00000309546 C22orf46C9J442 243 aa16.25■□□□□ 0.19
LIME1-201ENST00000309546 ADAM20O43506 726 aa16.25■□□□□ 0.19
LIME1-201ENST00000309546 ENSAO43768 121 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms