RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 OPN1MWP04001 364 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 RPS23P62266 143 aaKnown RBP12.22□□□□□ -0.45
TRIM56-201ENST00000306085 PITX1P78337 314 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-201ENST00000306085 TAZQ16635 292 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 TAAR2Q9P1P5 351 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 DGCR2P98153 550 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 C5orf46Q6UWT4 87 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 LHFPL2Q6ZUX7 228 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 BPIFA4PQ86YQ2 179 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-201ENST00000306085 SHHQ15465 462 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 PSORS1C1Q9UIG5 152 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 SOWAHCQ53LP3 525 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-201ENST00000306085 AMMECR1LQ6DCA0 310 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 SIRT6Q8N6T7 355 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 MBD3L1Q8WWY6 194 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 ZNF343Q6P1L6 599 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 DOK3Q7L591 496 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 ZFPM2Q8WW38 1151 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 SLAMF8Q9P0V8 285 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 KIR2DS5A0A0G2JLQ3 304 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 A0A0G2JNG1 304 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 KIR2DS3K7RE56 304 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 KIR2DS5Q14953 304 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 CBLL1Q75N03 491 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 CTRCQ99895 268 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
TRIM56-201ENST00000306085 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
TRIM56-201ENST00000306085 PLCE1Q9P212 2302 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 FAM157BP0CG42 384 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 AGBL4Q5VU57 503 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 ADAT1Q9BUB4 502 aaKnown RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 AKR7A3O95154 331 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 TRMT12Q53H54 448 aaKnown RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 SORT1Q99523 831 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 SPAG8Q99932 426 aaPredicted RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 CHST8Q9H2A9 424 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 NRASP01111 189 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 MGMTP16455 207 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 CHRNA7P36544 502 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 EIF1P41567 113 aaKnown RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 MRAP2Q96G30 205 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 GPR45Q9Y5Y3 372 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 HOXA4Q00056 320 aaPredicted RBP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 TMEM40Q8WWA1 233 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 SLC5A6Q9Y289 635 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 AP4M1O00189 453 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 LMX1BO60663 402 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 MELTFP08582 738 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRIM56-201ENST00000306085 MYBPHQ13203 477 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 AANATQ16613 207 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 GATA6Q92908 595 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 CHST2Q9Y4C5 530 aa12.21□□□□□ -0.45
TRIM56-201ENST00000306085 LOC107986453A0A1B0GWG9 222 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 WFDC8Q8IUA0 241 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF519Q8TB69 540 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 A0A096LPE4 126 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 A0A1W2PPZ6 126 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 SNRPEP62304 92 aaKnown RBP12.21□□□□□ -0.46
TRIM56-201ENST00000306085 Q6ZNX1 250 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 OOEPA6NGQ2 149 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 RAB38P57729 211 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 REC114Q7Z4M0 266 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 NUDT10Q8NFP7 164 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 NUDT11Q96G61 164 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 NUMBLQ9Y6R0 609 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 SLIT2O94813 1529 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 MGPP08493 103 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 TBXA2RP21731 343 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 ABI3BPQ7Z7G0 1075 aa12.21□□□□□ -0.46
TRIM56-201ENST00000306085 LOC107984156A0A0G2JMH3 177 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 SLC22A20A6NK97 555 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ARL17AQ8IVW1 177 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM178AQ8NBL3 297 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 CST7O76096 145 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ADPRHP54922 357 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF841Q6ZN19 808 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 GDF7Q7Z4P5 450 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 ZADH2Q8N4Q0 377 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 NPAS1Q99742 590 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 HSD11B1LQ7Z5J1 315 aa12.2□□□□□ -0.46
TRIM56-201ENST00000306085 UBQLN3Q9H347 655 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms