RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RAC1P63000 192 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF793Q6ZN11 406 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 BTLAQ7Z6A9 289 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 LSRQ86X29 649 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 DHHO43323 396 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 MYF5P13349 255 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OR4F5Q8NH21 305 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OR4F4Q96R69 305 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 SPTY2D1-AS1A0A0U1RR47 76 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 ANKUB1A6NFN9 424 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 INSM1Q01101 510 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 SSBP1Q04837 148 aaKnown RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 CDC20BQ86Y33 519 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 DND1Q8IYX4 353 aaKnown RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 LRRC61Q9BV99 259 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 TGIF2Q9GZN2 237 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 EMP3P54852 163 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 NOXO1Q8NFA2 376 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 HDGFL3Q9Y3E1 203 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 LOXL2Q9Y4K0 774 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 UBE2G1P62253 170 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 SKA3Q8IX90 412 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 NECAP1Q8NC96 275 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 NIT2Q9NQR4 276 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 A0A1B0GX12 115 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 ABCD4O14678 606 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 FAHP16930 419 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 DEFB108BQ8NET1 73 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OR10P1Q8NGE3 313 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 FN3KRPQ9HA64 309 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 PLAC1Q9HBJ0 212 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 KCNE1BA0A087WTH5 132 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 SLC17A2O00624 439 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 YBX1P67809 324 aaKnown RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 CDK5Q00535 292 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 PHYHD1Q5SRE7 291 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 RTN4IP1Q8WWV3 396 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF331Q9NQX6 463 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-201ENST00000303531 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 PYCARD-AS1I3L0S3 204 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 CLEC3BP05452 202 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 GNB1P62873 340 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 SPRY1O43609 319 aaPredicted RBP12.56□□□□□ -0.4
PRKCB-201ENST00000303531 UBE2G2P60604 165 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 DBX2Q6ZNG2 339 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 TMEM229BQ8NBD8 167 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 OR4S1Q8NGB4 309 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 GNB4Q9HAV0 340 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 CYSLTR2Q9NS75 346 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
PRKCB-201ENST00000303531 FOXJ3Q9UPW0 622 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 FAM58AQ8N1B3 248 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 GALNT16Q8N428 558 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 ZBTB44Q8NCP5 570 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 ZNF727A8MUV8 499 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 SUMO3P55854 103 aaPredicted RBP12.56□□□□□ -0.4
PRKCB-201ENST00000303531 SMAD4Q13485 552 aaKnown RBP12.56□□□□□ -0.4
PRKCB-201ENST00000303531 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 TTC9Q92623 222 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 OR8B4Q96RC9 309 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 DLL4Q9NR61 685 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 C20orf141Q9NUB4 165 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 HNF1AP20823 631 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 LHX4Q969G2 390 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 RREB1Q92766 1687 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 TMEM127O75204 238 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 TMPRSS11FQ6ZWK6 438 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 OR5AP2Q8NGF4 316 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 V9GYS6 101 aa12.56□□□□□ -0.4
PRKCB-201ENST00000303531 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 TRIM77I1YAP6 450 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 BCL2L11O43521 198 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 DTYMKP23919 212 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 AMER3Q8N944 861 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 NUP214P35658 2090 aaPredicted RBP12.55□□□□□ -0.4
PRKCB-201ENST00000303531 SCO1O75880 301 aa12.55□□□□□ -0.4
PRKCB-201ENST00000303531 CD37P11049 281 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms