RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 GHRLQ9UBU3 117 aa17.03■□□□□ 0.32
HOXC4-201ENST00000303406 ATPIF1Q9UII2 106 aa17.03■□□□□ 0.32
HOXC4-201ENST00000303406 ZNF391Q9UJN7 358 aa17.03■□□□□ 0.32
HOXC4-201ENST00000303406 TIMM10BQ9Y5J6 103 aa17.03■□□□□ 0.32
HOXC4-201ENST00000303406 SPAARA0A1B0GVQ0 90 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 FAM166BA8MTA8 275 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 IL5P05113 134 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 MELTFP08582 738 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 CELA3AP09093 270 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 VSIG8P0DPA2 414 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 SLC6A9P48067 706 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 TAS2R19P59542 299 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 UNC119Q13432 240 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 CEACAM16Q2WEN9 425 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 ZNF627Q7L945 461 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 FAM109AQ8N4B1 249 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 GIMAP1Q8WWP7 306 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 AQP3Q92482 292 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 ZNF775Q96BV0 537 aaPredicted RBP17.02■□□□□ 0.32
HOXC4-201ENST00000303406 SOX7Q9BT81 388 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 SLC6A15Q9H2J7 730 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 BCO1Q9HAY6 547 aa17.02■□□□□ 0.32
HOXC4-201ENST00000303406 NOSIPQ9Y314 301 aaKnown RBP17.02■□□□□ 0.32
HOXC4-201ENST00000303406 NCOA6Q14686 2063 aaPredicted RBP17.02■□□□□ 0.32
HOXC4-201ENST00000303406 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ARGFXA6NJG6 315 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 RAB27BO00194 218 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ICMTO60725 284 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 MRPL33O75394 65 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 CHRM2P08172 466 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ALDH3B1P43353 468 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 GZMKP49863 264 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 FCN2Q15485 313 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 METTL11BQ5VVY1 283 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 AWAT2Q6E213 333 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ANGPTL5Q86XS5 388 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 TMEM178AQ8NBL3 297 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 OR4C16Q8NGL9 310 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ALKBH3Q96Q83 286 aaPredicted RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 NKX3-1Q99801 234 aaPredicted RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 NOX3Q9HBY0 568 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 E9PLN8 166 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 RGS13O14921 159 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 FARS2O95363 451 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF32P17041 273 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ANOS1P23352 680 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 RFC3P40938 356 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 PPIAP62937 165 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 GUCA2AQ02747 115 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 TCF15Q12870 199 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 SLC10A1Q14973 349 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 RNPS1Q15287 305 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 RBMS2Q15434 407 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 LINC00303Q3SY05 128 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF260Q3ZCT1 412 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 KCNG3Q8TAE7 436 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 PRRX2Q99811 253 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 CHST5Q9GZS9 411 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 EXO5Q9H790 373 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 PTTG3PQ9NZH4 202 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 ITGB1BP2Q9UKP3 347 aa17.01■□□□□ 0.31
HOXC4-201ENST00000303406 MRPS28Q9Y2Q9 187 aaKnown RBP17.01■□□□□ 0.31
HOXC4-201ENST00000303406 VPS13AQ96RL7 3174 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 FAM172BPA6NC97 362 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 SULT1A3P0DMM9 295 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 SULT1A4P0DMN0 295 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 GTF2F2P13984 249 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 B4GALT1P15291 398 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 MRPS15P82914 257 aaKnown RBP17■□□□□ 0.31
HOXC4-201ENST00000303406 ST3GAL2Q16842 350 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 SLC16A14Q7RTX9 510 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 NAA40Q86UY6 237 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 C1orf147Q96MC9 270 aaPredicted RBP17■□□□□ 0.31
HOXC4-201ENST00000303406 BEX2Q9BXY8 128 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 OR2H1Q9GZK4 316 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 TP63Q9H3D4 680 aaPredicted RBP17■□□□□ 0.31
HOXC4-201ENST00000303406 RGCCQ9H4X1 137 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF224Q9NZL3 707 aa17■□□□□ 0.31
HOXC4-201ENST00000303406 AHCTF1Q8WYP5 2266 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 IGKV1-9A0A0C4DH69 117 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 SNRPGP15A8MWD9 76 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 CD74P04233 296 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 HCKP08631 526 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 RCVRNP35243 200 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF766Q5HY98 468 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 TSPO2Q5TGU0 170 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 OR10K2Q6IF99 312 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF774Q6NX45 483 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 STEAP1BQ6NZ63 245 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 GLIPR1L1Q6UWM5 242 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 GLDNQ6ZMI3 551 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-201ENST00000303406 GABRG1Q8N1C3 465 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 PNLDC1Q8NA58 520 aaKnown RBP16.99■□□□□ 0.31
HOXC4-201ENST00000303406 SGK3Q96BR1 496 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 OR10A4Q9H209 315 aa16.99■□□□□ 0.31
HOXC4-201ENST00000303406 ZNF552Q9H707 407 aaPredicted RBP16.99■□□□□ 0.31
HOXC4-201ENST00000303406 C5orf63A6NC05 138 aa16.98■□□□□ 0.31
HOXC4-201ENST00000303406 ARPC1BO15143 372 aaKnown RBP16.98■□□□□ 0.31
HOXC4-201ENST00000303406 DBHP09172 617 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms