RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CXXC1Q9P0U4 656 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 M0QZK8 103 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 GPR31O00270 319 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 VAMP3Q15836 100 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 NEIL1Q96FI4 390 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 TIMD4Q96H15 378 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR6C1Q96RD1 312 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 GOLT1BQ9Y3E0 138 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 MYO7AQ13402 2215 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 A0A1B0GTW7 788 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 MBTPS2O43462 519 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 GP1BAP07359 652 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 THBS4P35443 961 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 BTG2P78543 158 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR52N5Q8NH56 324 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 HLA-CQ95604 372 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 RNF167Q9H6Y7 350 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CTSFQ9UBX1 484 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR5H15A6NDH6 313 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR5H1A6NKK0 313 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 SLC17A2O00624 439 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 PPICP45877 212 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 NOVA1P51513 510 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 UCK1Q9HA47 277 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 SLC23A1Q9UHI7 598 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CD3DP04234 171 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 FUT6P51993 359 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR2G2Q8NGZ5 317 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 NT5CQ8TCD5 201 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 RAB40CQ96S21 281 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 WDR61Q9GZS3 305 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 BANF2Q9H503 90 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 GPR84Q9NQS5 396 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF816-ZNF321PA0A0X1KG74 233 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 B4DEV8 164 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 FZD6O60353 706 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CXCL12P48061 93 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CLDN15P56746 228 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CYHR1Q6ZMK1 362 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.93□□□□□ -1.33e-7■■■■■ 33.7
SF3B3-201ENST00000302516 SH2D5Q6ZV89 423 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR51E1Q8TCB6 317 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 LINC00615Q96LM1 132 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 HDGFL3Q9Y3E1 203 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 FAM166BA8MTA8 275 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 IGLV3-25P01717 112 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 MBPP02686 304 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 SLC25A6P12236 298 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 BSGP35613 385 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 SNRPNP63162 240 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ACKR1Q16570 336 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 PDZD11Q5EBL8 140 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ACSM5Q6NUN0 579 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 TAAR9Q96RI9 348 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF768Q9H5H4 540 aaKnown RBP6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CCKARP32238 428 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF154Q13106 437 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 COX19Q49B96 90 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 OR51H1Q8NH63 302 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 C11orf40Q8WZ69 217 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 SIGLEC6O43699 453 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 STAG3L2P0CL84 134 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PJVKQ0ZLH3 352 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 XAF1Q6GPH4 301 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ETFRF1Q6IPR1 90 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 NKAIN4Q8IVV8 208 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 SAT2Q96F10 170 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PCED1AQ9H1Q7 454 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 SLC2A9Q9NRM0 540 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 MEIKINA0A087WXM9 373 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 C21orf58P58505 322 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 KMT5CQ86Y97 462 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 STPG2Q8N412 459 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 AKR1E2Q96JD6 320 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 UBE2ZQ9H832 354 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 STRCP1A6NGW2 1772 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 A0A1W2PR48 441 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 F11P03951 625 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 OPN1MWP04001 364 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TRMT12Q53H54 448 aaKnown RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 B3GNTL1Q67FW5 361 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 RBM45Q8IUH3 476 aaKnown RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 RHBDD1Q8TEB9 315 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ZBP1Q9H171 429 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 CSF2RBP32927 897 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 IGFBP7Q16270 282 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms