RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 AQP8O94778 261 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 GLSO94925 669 aaPredicted RBP19.4■□□□□ 0.7
TPM4-201ENST00000300933 PCK2Q16822 640 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 TMPPEQ6ZT21 453 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 YRDCQ86U90 279 aaKnown RBP19.4■□□□□ 0.7
TPM4-201ENST00000300933 ZNF385AQ96PM9 386 aaKnown RBP19.4■□□□□ 0.7
TPM4-201ENST00000300933 CKLFQ9UBR5 152 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 MLXQ9UH92 298 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 ZNF726A6NNF4 738 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 ABCD4O14678 606 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 MECP2P51608 486 aaKnown RBP19.4■□□□□ 0.7
TPM4-201ENST00000300933 PABPC1L2AQ5JQF8 200 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 THEM4Q5T1C6 240 aa19.4■□□□□ 0.7
TPM4-201ENST00000300933 HSPB2A8KAH6 182 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 H7C2Y5 167 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 SLC17A2O00624 439 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 TTRP02766 147 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 LIFP15018 202 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 HSPB2Q16082 182 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 PHYHD1Q5SRE7 291 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 PPP1R32Q7Z5V6 425 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 ZNF546Q86UE3 836 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 COMMD2Q86X83 199 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 TMEM185AQ8NFB2 350 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 WNT2BQ93097 391 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 OXGR1Q96P68 337 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 ADAT1Q9BUB4 502 aaKnown RBP19.39■□□□□ 0.7
TPM4-201ENST00000300933 C1orf198Q9H425 327 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 DKKL1Q9UK85 242 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 TCFL5Q9UL49 500 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 ETV7Q9Y603 341 aa19.39■□□□□ 0.7
TPM4-201ENST00000300933 TNFSF11O14788 317 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 SGCAQ16586 387 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 LRRC37A5PQ49AS3 106 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 M1APQ8TC57 530 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 WDR13Q9H1Z4 485 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 SLC25A32Q9H2D1 315 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 EXO5Q9H790 373 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 FAM206AQ9NX38 181 aa19.39■□□□□ 0.69
TPM4-201ENST00000300933 PURGQ9UJV8 347 aaKnown RBP19.39■□□□□ 0.69
TPM4-201ENST00000300933 GGT3PA6NGU5 568 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 GPR31O00270 319 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 XRCC3O43542 346 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 GTF2F2P13984 249 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 FAUP35544 74 aaKnown RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 MLF1P58340 268 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 MRPS10P82664 201 aaKnown RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 RAB11FIP2Q7L804 512 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 ZNF627Q7L945 461 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 OR51E1Q8TCB6 317 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 CT55Q8WUE5 264 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 ADAT3Q96EY9 351 aaPredicted RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 ANGPTL4Q9BY76 406 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 PBOV1Q9GZY1 135 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 ZNF319Q9P2F9 582 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 R4GN57 208 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 C5orf63A6NC05 138 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 M0R296 226 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 RPA2P15927 270 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 HTR2CP28335 458 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 EIF1P41567 113 aaKnown RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 FGL1Q08830 312 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 ANKRD16Q6P6B7 361 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 NAA40Q86UY6 237 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 OR4D6Q8NGJ1 314 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 FAM46BQ96A09 425 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 ZNF75AQ96N20 296 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 AQP7P3A6NL99 342 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 MPTX1A8MV57 137 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 RFPL3SP0C7P2 107 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 SP9P0CG40 484 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 LUMP51884 338 aaPredicted RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 KLHL24Q6TFL4 600 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 GTPBP8Q8N3Z3 284 aaPredicted RBP19.38■□□□□ 0.69
TPM4-201ENST00000300933 LRRC18Q8N456 261 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 PAQR8Q8TEZ7 354 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 SCPEP1Q9HB40 452 aa19.38■□□□□ 0.69
TPM4-201ENST00000300933 LOC100289279A0A1B0GTE1 492 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 NPIPB13A6NJU9 1138 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 NPIPB4C9JG80 1138 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 IGFBP3P17936 291 aaPredicted RBP19.37■□□□□ 0.69
TPM4-201ENST00000300933 ACP1P24666 158 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 RGS19P49795 217 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 ATXN7L3Q14CW9 347 aaPredicted RBP19.37■□□□□ 0.69
TPM4-201ENST00000300933 TAF13Q15543 124 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 MOGAT2Q3SYC2 334 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 TMED4Q7Z7H5 227 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 OR2AJ1Q8NGZ0 328 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 DNTTIP1Q9H147 329 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 NCKAP5O14513 1909 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 TRAV14DV4A0A0A6YYC5 116 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 HSD11B1P28845 292 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 GLT8D1Q68CQ7 371 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 ZBTB8AQ96BR9 441 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 ZNF837Q96EG3 531 aaPredicted RBP19.37■□□□□ 0.69
TPM4-201ENST00000300933 FANCFQ9NPI8 374 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 RASL12Q9NYN1 266 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 HDGFL3Q9Y3E1 203 aa19.37■□□□□ 0.69
TPM4-201ENST00000300933 A0A0J9YW62 118 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 A0A1W2PNU3 283 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms