RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 A0A0U1RQK1 487 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 A0A1B0GX78 115 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 RFPL4AA6NLU0 287 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 RFPL4AL1F8VTS6 287 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 TAS2R31P59538 309 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 LTC4SQ16873 150 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 FAM74A3Q4VXF1 159 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 BPHLQ86WA6 291 aaPredicted RBP11.91□□□□□ -0.5
CASC4-201ENST00000299957 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 SEH1LQ96EE3 360 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 C12orf57Q99622 126 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 NIT2Q9NQR4 276 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 DICER1Q9UPY3 1922 aaKnown RBP11.91□□□□□ -0.5
CASC4-201ENST00000299957 PRR32B1ATL7 298 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 PCK2Q16822 640 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 ATG4DQ86TL0 474 aaPredicted RBP11.91□□□□□ -0.5
CASC4-201ENST00000299957 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 OR10G3Q8NGC4 313 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 MRPL38Q96DV4 380 aaKnown RBP11.91□□□□□ -0.5
CASC4-201ENST00000299957 AKR1E2Q96JD6 320 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 ATPIF1Q9UII2 106 aa11.91□□□□□ -0.5
CASC4-201ENST00000299957 HEATR5AQ86XA9 2040 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 SIGLEC6O43699 453 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 MGMTP16455 207 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 GALP22466 123 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 KIR3DL2P43630 455 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 FAM122BQ7Z309 247 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 SPTSSAQ969W0 71 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 ALKBH3Q96Q83 286 aaPredicted RBP11.9□□□□□ -0.5
CASC4-201ENST00000299957 KLHDC3Q9BQ90 382 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 MESP1Q9BRJ9 268 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 HS3ST3A1Q9Y663 406 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 R4GN57 208 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 GLAP06280 429 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 ZNF44P15621 663 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 MSX1P28360 303 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 BTCP35070 178 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 GPR3P46089 330 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 RNF4P78317 190 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 RAB32Q13637 225 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 FAM189A2Q15884 450 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 SLC26A10Q8NG04 563 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 RGP1Q92546 391 aaPredicted RBP11.9□□□□□ -0.5
CASC4-201ENST00000299957 LDAHQ9H6V9 325 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 KIAA2026Q5HYC2 2103 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 A0A096LPE4 126 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 A0A1W2PPZ6 126 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 MT-ATP6P00846 226 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 P04436 131 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 RRADP55042 308 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 DCAF7P61962 342 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 MYBPHQ13203 477 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 ASB5Q8WWX0 329 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 UBL7Q96S82 380 aaPredicted RBP11.9□□□□□ -0.5
CASC4-201ENST00000299957 SLC19A3Q9BZV2 496 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 EMC3Q9P0I2 261 aa11.9□□□□□ -0.5
CASC4-201ENST00000299957 TCF20Q9UGU0 1960 aaKnown RBP11.9□□□□□ -0.51
CASC4-201ENST00000299957 C2CD4DB7Z1M9 353 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 EFSO43281 561 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 IL5P05113 134 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 FCGR2CP31995 323 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 PRSS35Q8N3Z0 413 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 RNF128Q8TEB7 428 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
CASC4-201ENST00000299957 OBP2AQ9NY56 170 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 KIF25Q9UIL4 384 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 NOTCH4Q99466 2003 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 LOC285556D6RIA3 1793 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 HTTP42858 3142 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 LINC00862A6NCI5 91 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 OR2F2O95006 317 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 PNLIPP16233 465 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 OR2F1Q13607 317 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 HAGHQ16775 308 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 S1PR5Q9H228 398 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 TMEM184BQ9Y519 407 aaPredicted RBP11.89□□□□□ -0.51
CASC4-201ENST00000299957 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 CXorf51AA0A1B0GTR3 108 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 OR6C65A6NJZ3 312 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 ZP3P21754 424 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 INSM1Q01101 510 aaPredicted RBP11.89□□□□□ -0.51
CASC4-201ENST00000299957 ZNF141Q15928 474 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
CASC4-201ENST00000299957 NANPQ8TBE9 248 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms