RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SPEF1Q9Y4P9 236 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 CHCHD2Q9Y6H1 151 aaPredicted RBP12.04□□□□□ -0.48
CDH8-201ENST00000299345 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 RFPL4AA6NLU0 287 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 RFPL4AL1F8VTS6 287 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 ETV2O00321 342 aaPredicted RBP12.04□□□□□ -0.48
CDH8-201ENST00000299345 VAMP5O95183 116 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 CCL3P10147 92 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 AMY2BP19961 511 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 SLC51BQ86UW2 128 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 OR56B1Q8NGI3 324 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 MAFAQ8NHW3 353 aaPredicted RBP12.04□□□□□ -0.48
CDH8-201ENST00000299345 LY6G6EA0A0G2JKS1 128 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 D6RAR5 112 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 CD74P04233 296 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 KLK2P20151 261 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 OTX2P32243 289 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 OR3A4PP47883 348 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 LPCAT3Q6P1A2 487 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 TMEM17Q86X19 198 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 INO80EQ8NBZ0 244 aaPredicted RBP12.04□□□□□ -0.48
CDH8-201ENST00000299345 NICN1Q9BSH3 213 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 SOX7Q9BT81 388 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 ZNF471Q9BX82 626 aaPredicted RBP12.04□□□□□ -0.48
CDH8-201ENST00000299345 FANCFQ9NPI8 374 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 U3KQA8 63 aa12.04□□□□□ -0.48
CDH8-201ENST00000299345 A0A1B0GTI1 187 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 hCG_1807616A0A1W2PRN6 198 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 POU3F2P20265 443 aaPredicted RBP12.03□□□□□ -0.48
CDH8-201ENST00000299345 ZMYND11Q15326 602 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 TRIM61Q5EBN2 209 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 OR13C8Q8NGS7 320 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 APOC1P02654 83 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 P04436 131 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 DSCR4P56555 118 aaPredicted RBP12.03□□□□□ -0.48
CDH8-201ENST00000299345 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 LYG2Q86SG7 212 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 PAQR4Q8N4S7 273 aaPredicted RBP12.03□□□□□ -0.48
CDH8-201ENST00000299345 OR5H2Q8NGV7 314 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 OR14L1PQ8NHC6 308 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 ST6GALNAC5Q9BVH7 336 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 COQ3Q9NZJ6 369 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 TRAPPC6AO75865 159 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 SCO1O75880 301 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 NAXDQ8IW45 347 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 ST8SIA4Q92187 359 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 VSIG4Q9Y279 399 aa12.03□□□□□ -0.48
CDH8-201ENST00000299345 A0A0D9SG52 128 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 DHHO43323 396 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 CER1O95813 267 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 CYC1P08574 325 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 MELTFP08582 738 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 UBBP0CG47 229 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 TBPP20226 339 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 CHAF1BQ13112 559 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 OR2W3Q7Z3T1 314 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 OR5M8Q8NGP6 311 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 SPTSSAQ969W0 71 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 OR10A2Q9H208 303 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 SDHAF2Q9NX18 166 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.48
CDH8-201ENST00000299345 IGHV1-45A0A0A0MS14 117 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 GJE1A6NN92 205 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 SOCS1O15524 211 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 MTRF1O75570 445 aaKnown RBP12.02□□□□□ -0.49
CDH8-201ENST00000299345 GSTP1P09211 210 aaKnown RBP12.02□□□□□ -0.49
CDH8-201ENST00000299345 SERPINA2P20848 420 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 FADS6Q8N9I5 356 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 UCN2Q96RP3 112 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 PIGQQ9BRB3 760 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 NELFAQ9H3P2 528 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 ZNF230Q9UIE0 474 aaPredicted RBP12.02□□□□□ -0.49
CDH8-201ENST00000299345 CCDC163A0A0D9SF12 145 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 STMND1H3BQB6 276 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 ZNF735P0CB33 412 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 AVPR2P30518 371 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 DLSTP36957 453 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 GSK3AP49840 483 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 TAS2R31P59538 309 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 ZNF385AQ96PM9 386 aaKnown RBP12.02□□□□□ -0.49
CDH8-201ENST00000299345 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 NUP50Q9UKX7 468 aa12.02□□□□□ -0.49
CDH8-201ENST00000299345 OR5H15A6NDH6 313 aa12.01□□□□□ -0.49
CDH8-201ENST00000299345 CDC14BO60729 498 aa12.01□□□□□ -0.49
CDH8-201ENST00000299345 FCGR2AP12318 317 aa12.01□□□□□ -0.49
CDH8-201ENST00000299345 RPA2P15927 270 aa12.01□□□□□ -0.49
CDH8-201ENST00000299345 HIST1H1DP16402 221 aaKnown RBP12.01□□□□□ -0.49
CDH8-201ENST00000299345 NUP62P37198 522 aaPredicted RBP12.01□□□□□ -0.49
CDH8-201ENST00000299345 LSM6P62312 80 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms