RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TACR3P29371 465 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 AFF3P51826 1226 aaKnown RBP13.31□□□□□ -0.28
SPIDR-201ENST00000297423 SURF2Q15527 256 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-201ENST00000297423 BATFQ16520 125 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 ARMC6Q6NXE6 501 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 BIVMQ86UB2 503 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 OR2L8Q8NGY9 312 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 NUDT9Q9BW91 350 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 RAB11FIP5Q9BXF6 653 aa13.31□□□□□ -0.28
SPIDR-201ENST00000297423 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.285e-7■■■■■ 41.3
SPIDR-201ENST00000297423 LOC107986453A0A1B0GWG9 222 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 H0YGG7 62 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 H0YIZ8 118 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 APC2O95996 2303 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ZBTB25P24278 435 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 KIR3DL2P43630 455 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SP6Q3SY56 376 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF343Q6P1L6 599 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ADOQ96SZ5 270 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SCDO00767 359 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 OR8U8P0C7N1 319 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 DVL1P1P54792 670 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 MFGE8Q08431 387 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF813Q6ZN06 617 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SUMF1Q8NBK3 374 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF248Q8NDW4 579 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 OR4D6Q8NGJ1 314 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 TGM7Q96PF1 710 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SERINC2Q96SA4 455 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 PARPBPQ9NWS1 579 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 FBXL17Q9UF56 701 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 MDC1Q14676 2089 aaKnown RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ZNF726A6NNF4 738 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 CD37P11049 281 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 GAMTQ14353 236 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SLC35D3Q5M8T2 416 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 CBLN3Q6UW01 205 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 DRAM2Q6UX65 266 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SLC25A42Q86VD7 318 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ASB17Q8WXJ9 295 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 HLA-CQ95604 372 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 VSX1Q9NZR4 365 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 UNC80Q8N2C7 3258 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 SYT7O43581 403 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 CD8AP01732 235 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 RPS15AP62244 130 aaKnown RBP13.3□□□□□ -0.28
SPIDR-201ENST00000297423 FNDC9Q8TBE3 224 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 HPSE2Q8WWQ2 592 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 LPAR4Q99677 370 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 ATG101Q9BSB4 218 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 OR11A1Q9GZK7 315 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 LMAN1LQ9HAT1 526 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 HEBP2Q9Y5Z4 205 aa13.3□□□□□ -0.28
SPIDR-201ENST00000297423 HEATR5AQ86XA9 2040 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 PRSS38A1L453 326 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CTSVO60911 334 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CEACAM5P06731 702 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CTSEP14091 401 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 OR2T2Q6IF00 324 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 OR5T1Q8NG75 326 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 FAM212BQ9NTI7 297 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-201ENST00000297423 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-201ENST00000297423 C17orf51A8MQB3 221 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 SRFP11831 508 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 RPUSD3Q6P087 351 aaKnown RBP13.29□□□□□ -0.28
SPIDR-201ENST00000297423 SLC30A7Q8NEW0 376 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 OR10C1Q96KK4 312 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 FGF22Q9HCT0 170 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CHD9Q3L8U1 2897 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 VCANP13611 3396 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 PHYHO14832 338 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 FBP1P09467 338 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-201ENST00000297423 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CDCP2Q5VXM1 449 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 LANCL2Q9NS86 450 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 HRASLS2Q9NWW9 162 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 AKAP6Q13023 2319 aa13.29□□□□□ -0.28
SPIDR-201ENST00000297423 H0Y8X5 98 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms