RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 TMIGD3P0DMS9 266 aaPredicted RBP19.24■□□□□ 0.67
CCDC7-201ENST00000277657 ARSBP15848 533 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 MPGP29372 298 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 EIF2S3P41091 472 aaKnown RBP19.24■□□□□ 0.67
CCDC7-201ENST00000277657 DGCR2P98153 550 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 TMEM69Q5SWH9 247 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 CDH26Q8IXH8 852 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 OR4D6Q8NGJ1 314 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 SMIM4Q8WVI0 70 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 C10orf35Q96D05 121 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 CNTD2Q9H8S5 307 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 LHX6Q9UPM6 363 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 MTRF1O75570 445 aaKnown RBP19.23■□□□□ 0.67
CCDC7-201ENST00000277657 THBS4P35443 961 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 INPP1P49441 399 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 CAPZA1P52907 286 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 BIVMQ86UB2 503 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 OR5M9Q8NGP3 310 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 WNT2BQ93097 391 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 KCNK15Q9H427 330 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 RNF121Q9H920 327 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 DKK4Q9UBT3 224 aa19.23■□□□□ 0.67
CCDC7-201ENST00000277657 DHRS7CA6NNS2 312 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 LYRM1O43325 122 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 XRCC3O43542 346 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 CTAG2O75638 210 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 HLA-HP01893 362 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 COX5BP10606 129 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 MAP2K3P46734 347 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ZNF57Q68EA5 555 aaPredicted RBP19.22■□□□□ 0.67
CCDC7-201ENST00000277657 FAM214BQ7L5A3 538 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ZC3HAV1LQ96H79 300 aaKnown RBP19.22■□□□□ 0.67
CCDC7-201ENST00000277657 RBFOX1Q9NWB1 397 aaKnown RBP19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ACACAQ13085 2346 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ZNF503-AS2A6NEH8 195 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 AHRRA9YTQ3 701 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ALX3O95076 343 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 LCATP04180 440 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ALDOBP05062 364 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 TAS2R20P59543 309 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 CADM3Q8N126 398 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 OR1K1Q8NGR3 316 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 SSC4DQ8WTU2 575 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 C15orf40Q8WUR7 153 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 PP6455Q8WZ26 134 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 PTX4Q96A99 478 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 B3GNT2Q9NY97 397 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 ZNF391Q9UJN7 358 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 BOD1L1Q8NFC6 3051 aa19.22■□□□□ 0.67
CCDC7-201ENST00000277657 IGKV1-9A0A0C4DH69 117 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 K7ENP7 123 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 CD3GP09693 182 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 GABRA1P14867 456 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 ARR3P36575 388 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 PLEKHN1Q494U1 663 aaPredicted RBP19.21■□□□□ 0.67
CCDC7-201ENST00000277657 ACSF3Q4G176 576 aaPredicted RBP19.21■□□□□ 0.67
CCDC7-201ENST00000277657 MZT2BQ6NZ67 158 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 INO80CQ6PI98 192 aaPredicted RBP19.21■□□□□ 0.67
CCDC7-201ENST00000277657 TFAP2EQ6VUC0 442 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 UTS2BQ765I0 119 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 REEP6Q96HR9 211 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 C1QTNF5Q9BXJ0 243 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 CACNA1GO43497 2377 aa19.21■□□□□ 0.67
CCDC7-201ENST00000277657 CIB4A0PJX0 185 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 GABARAPH6UMI1 98 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 FAM157BP0CG42 384 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 ZNF93P35789 620 aaPredicted RBP19.2■□□□□ 0.66
CCDC7-201ENST00000277657 KIR2DL3P43628 341 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 MRPS10P82664 201 aaKnown RBP19.2■□□□□ 0.66
CCDC7-201ENST00000277657 COLCA1Q6ZS62 124 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 DPPA2Q7Z7J5 298 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 GCNT2Q8N0V5 402 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 CELF2-AS1Q8N7Q2 184 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 OR2AE1Q8NHA4 323 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 BCL2L2Q92843 193 aaPredicted RBP19.2■□□□□ 0.66
CCDC7-201ENST00000277657 CHST5Q9GZS9 411 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 RGCCQ9H4X1 137 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 NOX3Q9HBY0 568 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 LOC100509620A0A075B734 347 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 GGT3PA6NGU5 568 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 CRYABP02511 175 aaKnown RBP19.2■□□□□ 0.66
CCDC7-201ENST00000277657 FAHP16930 419 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 DNM1P46Q6ZS02 220 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 C9orf106Q8NAJ2 232 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 AUNIPQ9H7T9 357 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 DIABLOQ9NR28 239 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 PIGLQ9Y2B2 252 aa19.2■□□□□ 0.66
CCDC7-201ENST00000277657 BPNT1O95861 308 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 PRF1P14222 555 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 DUSP18Q8NEJ0 188 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 PPP1R14BQ96C90 147 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 ABHD17AQ96GS6 310 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 DOCK7Q96N67 2140 aa19.19■□□□□ 0.66
CCDC7-201ENST00000277657 CD79AP11912 226 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RAB6AP20340 208 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 ACKR3P25106 362 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RAB1AP62820 205 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 QRFPP83859 136 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 GPR176Q14439 515 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RNASE12Q5GAN4 147 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms