RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RAB1AP62820 205 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CXADRP78310 365 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 FOXF2Q12947 444 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 MADCAM1Q13477 382 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 TBRG1Q3YBR2 411 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 HIKESHIQ53FT3 197 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 PYHIN1Q6K0P9 492 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 VWA1Q6PCB0 445 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 BAIAP2L2Q6UXY1 529 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CDH26Q8IXH8 852 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 OR5AS1Q8N127 324 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CNEP1R1Q8N9A8 125 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 SETD6Q8TBK2 473 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 FAM57AQ8TBR7 257 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 FAM3DQ96BQ1 224 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 RGCCQ9H4X1 137 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 RABL2AQ9UBK7 228 aaPredicted RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 CGGBP1Q9UFW8 167 aaPredicted RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 RABL2BQ9UNT1 228 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 FAM215AQ9Y5M1 114 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 BOD1L1Q8NFC6 3051 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 LOC100289279A0A1B0GTE1 492 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 A0A1W2PQ09 198 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 FIGNL2A6NMB9 653 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 SULT1B1O43704 296 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CGAP01215 116 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 ALDOBP05062 364 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 TPOP07202 933 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 ERCC1P07992 297 aaPredicted RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 HOXD4P09016 255 aaPredicted RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 HTR2CP28335 458 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 TGFBR3Q03167 851 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 GLYATL3Q5SZD4 288 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 C1orf185Q5T7R7 199 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CCDC36Q8IYA8 594 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 Q8N402 240 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 OR52N4Q8NGI2 321 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 OR13C9Q8NGT0 318 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 SSC4DQ8WTU2 575 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 NANOS1Q8WY41 292 aaKnown RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 HAVCR1Q96D42 359 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 REEP6Q96HR9 211 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 ZNF75AQ96N20 296 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 ABHD1Q96SE0 405 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 UQCC2Q9BRT2 126 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 TBC1D24Q9ULP9 559 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 MAP1BP46821 2468 aaKnown RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 SPENQ96T58 3664 aaKnown RBP14.22□□□□□ -0.13
TPM1-201ENST00000267996 BSNQ9UPA5 3926 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 TPPPO94811 219 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 TOXO94900 526 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 FAM87AP0C7U9 286 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 HOXB1P14653 301 aaPredicted RBP14.22□□□□□ -0.13
TPM1-201ENST00000267996 POU3F4P49335 361 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 ART1P52961 327 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 DEFA1P59665 94 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 DEFA3P59666 94 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 EIF2S3LQ2VIR3 472 aaKnown RBP14.22□□□□□ -0.13
TPM1-201ENST00000267996 C2orf76Q3KRA6 126 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 UTS2BQ765I0 119 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 CD163Q86VB7 1156 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 ZNF584Q8IVC4 421 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 CISD2Q8N5K1 135 aaKnown RBP14.22□□□□□ -0.13
TPM1-201ENST00000267996 POC5Q8NA72 575 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 OR51D1Q8NGF3 324 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 SYNPRQ8TBG9 265 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 PP6455Q8WZ26 134 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 SPSB4Q96A44 273 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 STARD4Q96DR4 205 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 POM121L2Q96KW2 1035 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 ZFP3Q96NJ6 502 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 SLX1AQ9BQ83 275 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 METTL17Q9H7H0 456 aaPredicted RBP14.22□□□□□ -0.13
TPM1-201ENST00000267996 PLEKHA1Q9HB21 404 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 RHBDL2Q9NX52 303 aa14.22□□□□□ -0.13
TPM1-201ENST00000267996 INTS1Q8N201 2190 aaKnown RBP14.21□□□□□ -0.13
TPM1-201ENST00000267996 LDLRAD4O15165 306 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 EDN3P14138 238 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 PRF1P14222 555 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 STOMP27105 288 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 TIMP3P35625 211 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 MNDAP41218 407 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 PLP2Q04941 152 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 SCN1BQ07699 218 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 PLA2G7Q13093 441 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 GABRA6Q16445 453 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 TRIM16LQ309B1 348 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 GABRG1Q8N1C3 465 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 DTX3Q8N9I9 347 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 C1orf162Q8NEQ5 155 aaPredicted RBP14.21□□□□□ -0.13
TPM1-201ENST00000267996 OR2AE1Q8NHA4 323 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 COX4I2Q96KJ9 171 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 SORCS2Q96PQ0 1159 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 CHST5Q9GZS9 411 aa14.21□□□□□ -0.13
TPM1-201ENST00000267996 NCOR2Q9Y618 2525 aa14.21□□□□□ -0.14
TPM1-201ENST00000267996 IGKV1-9A0A0C4DH69 117 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 CTDSPLO15194 276 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 XRCC2O43543 280 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 PTTG1O95997 202 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 CAPZA1P52907 286 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms