RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FAM117AQ9C073 453 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 GPR84Q9NQS5 396 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 UBE2QL1A1L167 161 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 TMEM235A6NFC5 223 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 RFPL4AA6NLU0 287 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 RFPL4AL1F8VTS6 287 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 CYB5AP00167 134 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 RRASP10301 218 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 C4BPBP20851 252 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 MPGP29372 298 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 CLDN17P56750 224 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 TSPAN5P62079 268 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ECH1Q13011 328 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF345Q14585 488 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF468Q5VIY5 522 aaPredicted RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 PRAMEF20Q5VT98 475 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 Q7L0L9 218 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF627Q7L945 461 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF385AQ96PM9 386 aaKnown RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 REG4Q9BYZ8 158 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 IRF2BPLQ9H1B7 796 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 A0A0J9YW62 118 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 GJE1A6NN92 205 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 NOS1APO75052 506 aaPredicted RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 FOLR3P41439 243 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 TRIM61Q5EBN2 209 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 C1QTNF12Q5T7M4 302 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 OR10K2Q6IF99 312 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 ASCL4Q6XD76 172 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 RPS19BP1Q86WX3 136 aaKnown RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 HOGA1Q86XE5 327 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 GJC3Q8NFK1 279 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 LAMTOR5O43504 91 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 TLX3O43711 291 aaPredicted RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 ZNF84P51523 738 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 RAC3P60763 192 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 HLXQ14774 488 aaPredicted RBP9.8□□□□□ -0.84
MSH3-201ENST00000265081 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 TRAPPC6BQ86SZ2 158 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 GPR137CQ8N3F9 429 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 ZBTB44Q8NCP5 570 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 MR1Q95460 341 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 CHST5Q9GZS9 411 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 TMEM185BQ9H7F4 350 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 C5orf63A6NC05 138 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 MEIS3P1A6NDR6 274 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 ZNF726A6NNF4 738 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 M0R233 179 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 SYNGR3O43761 229 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 DHRS3O75911 302 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 PPP3CBP16298 524 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 TMEM50BP56557 158 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 FAM189A2Q15884 450 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 NRN1LQ496H8 165 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 CDCP2Q5VXM1 449 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 LHFPL1Q86WI0 220 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 ACBD4Q8NC06 268 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 OR6K3Q8NGY3 331 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 KCNG3Q8TAE7 436 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 MITD1Q8WV92 249 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 ST8SIA4Q92187 359 aa9.8□□□□□ -0.84
MSH3-201ENST00000265081 NSG1A0A0A6YYJ2 146 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 CST2P09228 141 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ICAM2P13598 275 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ZNF35P13682 527 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 HIST1H1DP16402 221 aaKnown RBP9.79□□□□□ -0.84
MSH3-201ENST00000265081 ABOP16442 354 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 SFTPDP35247 375 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 GFRA1P56159 465 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 RPS27AP62979 156 aaKnown RBP9.79□□□□□ -0.84
MSH3-201ENST00000265081 DHRS2Q13268 280 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 GPAT4Q86UL3 456 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ZNF584Q8IVC4 421 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 PP6455Q8WZ26 134 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 TMEM45BQ96B21 275 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 EXO5Q9H790 373 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 CFAP54Q96N23 3096 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 OR6C6A6NF89 314 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 M0QYG6 137 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 CFIP05156 583 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 SSTR2P30874 369 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 SSPNQ14714 243 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 TMEM42Q69YG0 159 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 LYG2Q86SG7 212 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ANGPTL5Q86XS5 388 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 ZNF100Q8IYN0 542 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 BPIFB2Q8N4F0 458 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 TMEM185AQ8NFB2 350 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 OR13C9Q8NGT0 318 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 GNRHR2Q96P88 292 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 DPCDQ9BVM2 203 aaPredicted RBP9.79□□□□□ -0.84
MSH3-201ENST00000265081 ZNF160Q9HCG1 818 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 TCFL5Q9UL49 500 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms