RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SIGLEC11Q96RL6 698 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 UBE2L5PA0A1B0GUS4 154 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
COL5A3-201ENST00000264828 OR5H8P0DN80 308 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 MGMTP16455 207 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 EPHA2P29317 976 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 ANKRD33Q7Z3H0 272 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 BAP18Q8IXM2 172 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 SRRQ9GZT4 340 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 SLC25A19Q9HC21 320 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 H3BP45 60 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 ASCL1P50553 236 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 LAMP3Q9UQV4 416 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 BCL2L11O43521 198 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 PIAS2O75928 621 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 NQO2P16083 231 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 RAB1AP62820 205 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 GNB2P62879 340 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 H3F3AP84243 136 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 C16orf52Q8NHV5 167 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 PLEKHA2Q9HB19 425 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 POM121BA6NF01 834 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 CDAP32320 146 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 ZNF121P58317 390 aaPredicted RBP16.28■□□□□ 0.2
COL5A3-201ENST00000264828 C11orf91Q3C1V1 193 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 OR2A14Q96R47 310 aa16.28■□□□□ 0.2
COL5A3-201ENST00000264828 ARAP2Q8WZ64 1704 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 YKT6O15498 198 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 IGFBP6P24592 240 aaPredicted RBP16.27■□□□□ 0.2
COL5A3-201ENST00000264828 AGBL4Q5VU57 503 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 ZDHHC11Q9H8X9 412 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 IDSB3KWA1 339 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 TERTO14746 1132 aaKnown RBP16.27■□□□□ 0.2
COL5A3-201ENST00000264828 INSM1Q01101 510 aaPredicted RBP16.27■□□□□ 0.2
COL5A3-201ENST00000264828 CDC20Q12834 499 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 LINC00303Q3SY05 128 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 TCTN3Q6NUS6 607 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.2
COL5A3-201ENST00000264828 TARM1B6A8C7 271 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 UPK1AO00322 258 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 SFTA3P0C7M3 94 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 ST6GAL1P15907 406 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 TMEM240Q5SV17 173 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 MAMSTRQ6ZN01 415 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 OR4S1Q8NGB4 309 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 OR8B4Q96RC9 309 aa16.27■□□□□ 0.2
COL5A3-201ENST00000264828 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.19
COL5A3-201ENST00000264828 RRASP10301 218 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 ARR3P36575 388 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 PPIAP62937 165 aaKnown RBP16.27■□□□□ 0.19
COL5A3-201ENST00000264828 ZDHHC23Q8IYP9 409 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 TDHQ8IZJ6 230 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 CORO2AQ92828 525 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 COX5AP20674 150 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 PTOV1Q86YD1 416 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF573Q86YE8 665 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 EXD3Q8N9H8 876 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 TMEM18Q96B42 140 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 MFRPQ9BY79 579 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 DLL4Q9NR61 685 aa16.27■□□□□ 0.19
COL5A3-201ENST00000264828 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.19
COL5A3-201ENST00000264828 TGOLN2O43493 480 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 GLB1P16278 677 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 BSGP35613 385 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 TRMT61AQ96FX7 289 aaKnown RBP16.26■□□□□ 0.19
COL5A3-201ENST00000264828 DUSP21Q9H596 190 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 SNRPGP15A8MWD9 76 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 CD1EP15812 388 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 BPIFB3P59826 476 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ERHP84090 104 aaKnown RBP16.26■□□□□ 0.19
COL5A3-201ENST00000264828 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
COL5A3-201ENST00000264828 OR52N5Q8NH56 324 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 TIMD4Q96H15 378 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 FOXQ1Q9C009 403 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 SPNS1Q9H2V7 528 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ST3GAL6Q9Y274 331 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 FAM96BQ9Y3D0 163 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF195O14628 629 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 PHOX2AO14813 284 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 COX7A2P2O60397 106 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 HMGA1P17096 107 aaKnown RBP16.26■□□□□ 0.19
COL5A3-201ENST00000264828 Q1RN00 199 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 SYS1Q8N2H4 156 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 BAHD1Q8TBE0 780 aaPredicted RBP16.26■□□□□ 0.19
COL5A3-201ENST00000264828 B4GALT1P15291 398 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF17P17021 662 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 SLC25A26Q70HW3 274 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF485Q8NCK3 441 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 OXGR1Q96P68 337 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 SLC2A8Q9NY64 477 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 PRRT4C9JH25 899 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 CDK5Q00535 292 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 CYHR1Q6ZMK1 362 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 WFDC8Q8IUA0 241 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF596Q8TC21 504 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 TIMM9Q9Y5J7 89 aa16.26■□□□□ 0.19
COL5A3-201ENST00000264828 CXCL13O43927 109 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 ONECUT2O95948 504 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 PCBP4P57723 403 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms