RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 DIABLOQ9NR28 239 aa13.8□□□□□ -0.2
VPS26A-201ENST00000263559 PRSS50Q9UI38 385 aa13.8□□□□□ -0.2
VPS26A-201ENST00000263559 ZNF175Q9Y473 711 aa13.8□□□□□ -0.2
VPS26A-201ENST00000263559 V9GYS6 101 aa13.8□□□□□ -0.2
VPS26A-201ENST00000263559 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 CIB4A0PJX0 185 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 PABPC1L2AQ5JQF8 200 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 IGFL3Q6UXB1 125 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 ZNF627Q7L945 461 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 ADGRE4PQ86SQ3 457 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 FCAMRQ8WWV6 532 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 KLK11Q9UBX7 282 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 DOCK7Q96N67 2140 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 DCHS1Q96JQ0 3298 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 MEIOCA2RUB1 952 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 GGT3PA6NGU5 568 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 LCATP04180 440 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 ERCC1P07992 297 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 SLC6A1P30531 599 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 BTCP35070 178 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 ZNF93P35789 620 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 ZNF169Q14929 603 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 DMRTC1Q5HYR2 192 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 Q6ZSR3 168 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 CPEB3Q8NE35 698 aaKnown RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 OR2AE1Q8NHA4 323 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 GAL3ST1Q99999 423 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 UQCC2Q9BRT2 126 aa13.79□□□□□ -0.2
VPS26A-201ENST00000263559 PRRC2CQ9Y520 2896 aaKnown RBP13.79□□□□□ -0.2
VPS26A-201ENST00000263559 LAMA5O15230 3695 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 IGKV1-9A0A0C4DH69 117 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 GABRA1P14867 456 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 KLF9Q13886 244 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-201ENST00000263559 MYO7BQ6PIF6 2116 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 C15orf40Q8WUR7 153 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 HPS1Q92902 700 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 MRPL15Q9P015 296 aaKnown RBP13.78□□□□□ -0.2
VPS26A-201ENST00000263559 TRAV18A0A075B6X5 111 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 AQP7O14520 342 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 TPPPO94811 219 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 FAHP16930 419 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 MRPS10P82664 201 aaKnown RBP13.78□□□□□ -0.2
VPS26A-201ENST00000263559 AGAP6Q5VW22 663 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 P4HA3Q7Z4N8 544 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 SCNM1Q9BWG6 230 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 PIGLQ9Y2B2 252 aa13.78□□□□□ -0.2
VPS26A-201ENST00000263559 MTRF1O75570 445 aaKnown RBP13.77□□□□□ -0.2
VPS26A-201ENST00000263559 HLA-HP01893 362 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 PDGFAP04085 211 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 FCGR2AP12318 317 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 RSBN1Q5VWQ0 802 aaPredicted RBP13.77□□□□□ -0.2
VPS26A-201ENST00000263559 ANGPTL5Q86XS5 388 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 UPRTQ96BW1 309 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 GP6Q9HCN6 339 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 CLCF1Q9UBD9 225 aa13.77□□□□□ -0.2
VPS26A-201ENST00000263559 RBMX2Q9Y388 322 aaKnown RBP13.77□□□□□ -0.2
VPS26A-201ENST00000263559 A0A0B4J293 547 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 CENPXA8MT69 81 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 HCKP08631 526 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 THBS4P35443 961 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 PLA1AQ53H76 456 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 PAQR4Q8N4S7 273 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-201ENST00000263559 ITPKCQ96DU7 683 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 REEP6Q96HR9 211 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-201ENST00000263559 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 GFRA3O60609 400 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 RANBP1P43487 201 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 UBE2V2Q15819 145 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 DNM1P46Q6ZS02 220 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 PTX4Q96A99 478 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 MARVELD1Q9BSK0 173 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
VPS26A-201ENST00000263559 K7EM74 188 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 CAPZA1P52907 286 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 QRFPP83859 136 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 PMPCAQ10713 525 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
VPS26A-201ENST00000263559 DYRK1AQ13627 763 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 FBXW9Q5XUX1 488 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 CCDC54Q8NEL0 328 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 SSC4DQ8WTU2 575 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 CHAC2Q8WUX2 184 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 ITFG2Q969R8 447 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 BPNT1O95861 308 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 MT-ND4P03905 459 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 ALDOBP05062 364 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 VSIG8P0DPA2 414 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 ACKR3P25106 362 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 PRSS12P56730 875 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 UNC119Q13432 240 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 AWAT2Q6E213 333 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 CDH26Q8IXH8 852 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 PP6455Q8WZ26 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms