RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MT-ND2P03891 347 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CFL1P23528 166 aaKnown RBP14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CCR9P51686 369 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 GBX2P52951 348 aaPredicted RBP14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 GFOD2Q3B7J2 385 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 ALKBH6Q3KRA9 238 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 WDR38Q5JTN6 314 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 BCL2L15Q5TBC7 163 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 OR2T2Q6IF00 324 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 MRPL21Q7Z2W9 205 aaKnown RBP14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 LYZL4Q96KX0 146 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 LURAP1Q96LR2 239 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 TAAR3PQ9P1P4 343 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 DSCAMO60469 2012 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CD53P19397 219 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 KIR3DL2P43630 455 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 TGM4P49221 684 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 WNT4P56705 351 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 PRSS12P56730 875 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 SNRPD2P62316 118 aaKnown RBP14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 FAM3AP98173 230 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 MOGQ16653 247 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CCDC58Q4VC31 144 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 XAF1Q6GPH4 301 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 KLBQ86Z14 1044 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 OR51E1Q8TCB6 317 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CCL19Q99731 98 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 SOX7Q9BT81 388 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 MND1Q9BWT6 205 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 CCDC90BQ9GZT6 254 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 ST6GALNAC2Q9UJ37 374 aa14.22□□□□□ -0.13
CHCHD3-201ENST00000262570 hCG_38984A0A1B0GV85 526 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 A0A1W2PPW3 197 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 TRIM64A6NGJ6 449 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 OVOL3O00110 214 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 MRPS14O60783 128 aaKnown RBP14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 LALBAP00709 142 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 RAF1P04049 648 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 BMP4P12644 408 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 SELEP16581 610 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 MMP15P51511 669 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 GTF2A1P52655 376 aaPredicted RBP14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 TNK1Q13470 666 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 ALKBH1Q13686 389 aaKnown RBP14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 PIGTQ969N2 578 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 GPR84Q9NQS5 396 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 FBXO9Q9UK97 447 aaPredicted RBP14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 EDARQ9UNE0 448 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 PLEKHA6Q9Y2H5 1048 aa14.21□□□□□ -0.14
CHCHD3-201ENST00000262570 CSMD1Q96PZ7 3565 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 A0A1B0GTI1 187 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 OR4C45A6NMZ5 311 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 CD300LBA8K4G0 201 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 IQCF6A8MYZ5 107 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 M0R233 179 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 TIMM8AO60220 97 aaPredicted RBP14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 ALDH3B1P43353 468 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 CHN2P52757 468 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 DOC2BQ14184 412 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 OR8B8Q15620 311 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 NKPD1Q17RQ9 610 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 KCTD21Q4G0X4 260 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 RPL22L1Q6P5R6 122 aaKnown RBP14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 PLPP7Q8NBV4 271 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 CACNG6Q9BXT2 260 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 TRIM36Q9NQ86 728 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 CGGBP1Q9UFW8 167 aaPredicted RBP14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 GPR160Q9UJ42 338 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 LSM2Q9Y333 95 aaKnown RBP14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 PMF1-BGLAPU3KQ54 211 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 NAV2Q8IVL1 2488 aa14.2□□□□□ -0.14
CHCHD3-201ENST00000262570 NOTCH2Q04721 2471 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 GGT3PA6NGU5 568 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 P2RY10O00398 339 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 LIPAP38571 399 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 DDOSTP39656 456 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 GSK3AP49840 483 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 SPHARQ15513 63 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 ODF4Q2M2E3 257 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 OR5AS1Q8N127 324 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 OR8G5Q8NG78 346 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 OR56B2PQ8NGI1 322 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 RPS4Y2Q8TD47 263 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 ITFG2Q969R8 447 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 OR5M11Q96RB7 305 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 MS4A5Q9H3V2 200 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 SIRT4Q9Y6E7 314 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
CHCHD3-201ENST00000262570 SETXQ7Z333 2677 aaKnown RBP14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 TRBV2A0A0J9YWF9 115 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 LOC390937A0A1W2PQ73 354 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 PLSCR5A0PG75 271 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 OGG1O15527 345 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 LILRA1O75019 489 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 ZFPL1O95159 310 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 ISG15P05161 165 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 UBCP0CG48 685 aaKnown RBP14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 ATP6V1B1P15313 513 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 CCL1P22362 96 aa14.18□□□□□ -0.14
CHCHD3-201ENST00000262570 ACKR3P25106 362 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms