RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CAMKMTQ7Z624 323 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 SARAFQ96BY9 339 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 ZNF768Q9H5H4 540 aaKnown RBP12.95□□□□□ -0.34
CUX2-201ENST00000261726 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 NSG2Q9Y328 171 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 CNN1P51911 297 aaKnown RBP12.95□□□□□ -0.34
CUX2-201ENST00000261726 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
CUX2-201ENST00000261726 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 FBXO17Q96EF6 278 aa12.95□□□□□ -0.34
CUX2-201ENST00000261726 ESRP2Q9H6T0 727 aaKnown RBP12.95□□□□□ -0.34
CUX2-201ENST00000261726 XRCC2O43543 280 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 FGF17O60258 216 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 KLKB1P03952 638 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 NID1P14543 1247 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 SLC25A26Q70HW3 274 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TCTE3Q8IZS6 198 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 OR2A1Q8NGT9 310 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 CLEC18AA5D8T8 446 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 H3BP45 60 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 PRSS36Q5K4E3 855 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 CLEC9AQ6UXN8 241 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 GLCCI1Q86VQ1 547 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 COMMD1Q8N668 190 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 WDR31Q8NA23 367 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 CLEC18CQ8NCF0 446 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 SYT6Q5T7P8 510 aaPredicted RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 RGS7BPQ6MZT1 257 aaPredicted RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 C10orf90Q96M02 699 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 MARCH5Q9NX47 278 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 ING1Q9UK53 422 aaPredicted RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 COL4A1P02462 1669 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TRIM77I1YAP6 450 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 BMPR1BO00238 502 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 BTG1P62324 171 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 ACSM5Q6NUN0 579 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 LOXHD1Q8IVV2 1947 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 SLC22A20A6NK97 555 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 HOXC8P31273 242 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 EMDP50402 254 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 ACSM6Q6P461 480 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 ETFBKMTQ8IXQ9 262 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
CUX2-201ENST00000261726 DDX60LQ5H9U9 1706 aaKnown RBP12.94□□□□□ -0.34
CUX2-201ENST00000261726 TGOLN2O43493 480 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 GATCO43716 136 aaKnown RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 VAMP5O95183 116 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 CD22P20273 847 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 DGAT2L6Q6ZPD8 337 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 CMTM4Q8IZR5 234 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 GPX8Q8TED1 209 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 KCNE4Q8WWG9 221 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 HES4Q9HCC6 221 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 DUSP22Q9NRW4 184 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ANKUB1A6NFN9 424 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 GALMQ96C23 342 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 LAT2Q9GZY6 243 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ZNF195O14628 629 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 FABP4P15090 132 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 CDAP32320 146 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 MEOX1P50221 254 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 SHBQ15464 509 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 CIB3Q96Q77 187 aaPredicted RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 C19orf53Q9UNZ5 99 aaPredicted RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 LAMP3Q9UQV4 416 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 CD3DP04234 171 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 UBE3DQ7Z6J8 389 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 TMEM18Q96B42 140 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 NXF2Q9GZY0 626 aaKnown RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 LY75O60449 1722 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 OR4E1P0C645 316 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ZNF121P58317 390 aaPredicted RBP12.93□□□□□ -0.34
CUX2-201ENST00000261726 EMC4Q5J8M3 183 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 OR2T2Q6IF00 324 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 TMEM88Q6PEY1 159 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ARIH2OSQ8N7S6 290 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 DYNC2LI1Q8TCX1 351 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 ACER3Q9NUN7 267 aa12.93□□□□□ -0.34
CUX2-201ENST00000261726 R4GMQ9 66 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms