RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 C1orf232A0A0U1RR37 186 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SNTNA6NMZ2 147 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 KCNK1O00180 336 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SRPX2O60687 465 aaPredicted RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 CTAG2O75638 210 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 POP7O75817 140 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 OR2B3O76000 313 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 CDK14O94921 469 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SLC2A10O95528 541 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TSPAN12O95859 305 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SERPINA3P01011 423 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 AGTP01019 485 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 THY1P04216 161 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SHBGP04278 402 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 LAMP1P11279 417 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 NEFHP12036 1026 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 RNH1P13489 461 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 ABOP16442 354 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 CD80P33681 288 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TAGLN2P37802 199 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SPAM1P38567 509 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 MAGEA8P43361 318 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 XCR1P46094 333 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 HCAR3P49019 387 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 DCDP81605 110 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 ST3GAL3Q11203 375 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 PAFAH1B3Q15102 231 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TMED2Q15363 201 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 Q1RN00 199 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 DEFB110Q30KQ9 67 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 NKAIN1Q4KMZ8 207 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TP53I3Q53FA7 332 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 FAM120AOSQ5T036 256 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 LIPNQ5VXI9 398 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 ANKRD22Q5VYY1 191 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 PAMR1Q6UXH9 720 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SHISA6Q6ZSJ9 500 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 C3orf62Q6ZUJ4 267 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TRAPPC5Q8IUR0 188 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SLC35F2Q8IXU6 374 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 BBS5Q8N3I7 341 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 RPRMLQ8N4K4 120 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TRAM1L1Q8N609 369 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 KIR3DL3Q8N743 410 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 FBXO36Q8NEA4 188 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 OR4E2Q8NGC2 313 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 OR51G2Q8NGK0 314 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 OR5L2Q8NGL0 311 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 AKR7LQ8NHP1 331 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 MRAPQ8TCY5 172 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 CDKL2Q92772 493 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SERPINB12Q96P63 405 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 PPP1R2P1Q96PQ5 205 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 VAT1Q99536 393 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 COPS8Q99627 209 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 PAIP2Q9BPZ3 127 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 SPATA16Q9BXB7 569 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 HES7Q9BYE0 225 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 IQCGQ9H095 443 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 KIR3DX1Q9H7L2 352 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 WDR54Q9H977 334 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 NT5MQ9NPB1 228 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 IMP3Q9NV31 184 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 EURLQ9NYK6 297 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 DHRS4-AS1Q9P1J3 65 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 CELA1Q9UNI1 258 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 AK6Q9Y3D8 172 aaKnown RBP3.5□□□□□ -1.85
TRA2B-201ENST00000259043 TIMM10BQ9Y5J6 103 aa3.5□□□□□ -1.85
TRA2B-201ENST00000259043 MGAM2Q2M2H8 2515 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.49□□□□□ -1.853e-9■■■■□ 23.2
TRA2B-201ENST00000259043 TENM1Q9UKZ4 2725 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 MPDZO75970 2070 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 IQANK1A0A1B0GTG1 560 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 VSTM2BA6NLU5 285 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 CCT8L1PA6NM43 557 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 IDSB3KWA1 339 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 FCN1O00602 326 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 TIMM8AO60220 97 aaPredicted RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 CDH16O75309 829 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 WBP4O75554 376 aaKnown RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 HLA-DQB2P05538 268 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PIRTP0C851 137 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 COX6A1P12074 109 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PGAM2P15259 253 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 CCNCP24863 283 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PTBP1P26599 531 aaKnown RBP eCLIP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 HNRNPA3P51991 378 aaKnown RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 CDK16Q00536 496 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PPIDQ08752 370 aaKnown RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 SERTAD2Q14140 314 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 TIGITQ495A1 244 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 ZNF658BQ4V348 819 aaPredicted RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 MARC1Q5VT66 337 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 PDPK2PQ6A1A2 396 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 TTC19Q6DKK2 380 aaPredicted RBP3.49□□□□□ -1.85
TRA2B-201ENST00000259043 C6orf89Q6UWU4 347 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 C2orf66Q6UXQ4 117 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 LINC00523Q86TU6 105 aa3.49□□□□□ -1.85
TRA2B-201ENST00000259043 SLC22A9Q8IVM8 553 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms