RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GFOD1Q9NXC2 390 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 A0A1W2PPV4 95 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 FAM183AA6NL82 134 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 TUSC2O75896 110 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 HRASP01112 189 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 CCL3P10147 92 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 PPT1P50897 306 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 SLC35B1P78383 322 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 COMMD5Q9GZQ3 224 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 LOC101059948A0A1B0GTJ6 334 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 F2RL2O00254 374 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 FOXH1O75593 365 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 OR8U8P0C7N1 319 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 ERVFRD-1P60508 538 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 ARL16Q0P5N6 197 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 TBPL2Q6SJ96 375 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 SPACA3Q8IXA5 215 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 NEIL1Q96FI4 390 aaPredicted RBP11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 MED29Q9NX70 200 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 SF3B6Q9Y3B4 125 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 BET1O15155 118 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 KNG1P01042 644 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 CSN1S1P47710 185 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 RPS16P62249 146 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 MS4A2Q01362 244 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 RNLSQ5VYX0 342 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 SLC38A9Q8NBW4 561 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 FAM222BQ8WU58 562 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 GPR35Q9HC97 309 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 MIOXQ9UGB7 285 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 THSD7BQ9C0I4 1608 aa11.98□□□□□ -0.49
PRPF38A-201ENST00000257181 GMDSO60547 372 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 PTH2RP49190 550 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 IGLV3-21P80748 117 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 ANGPTL5Q86XS5 388 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 ZNF511Q8NB15 262 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 OR8B4Q96RC9 309 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 MS4A7Q9GZW8 240 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 SLC25A42Q86VD7 318 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 FUNDC1Q8IVP5 155 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 SLC22A13Q9Y226 551 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 A0A0B4J203 849 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 SELENOFO60613 162 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 CBR1P16152 277 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 CAV3P56539 151 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 TMEM81Q6P7N7 255 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 B3GNT8Q7Z7M8 397 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 DFFBO76075 338 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 GALP22466 123 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 ZNF121P58317 390 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 OR52I1Q8NGK6 324 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 GPR137Q96N19 417 aa11.97□□□□□ -0.49
PRPF38A-201ENST00000257181 CSF2RBP32927 897 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 HAAOP46952 286 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 RPS4XP62701 263 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 ZFP36L1Q07352 338 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 PCOLCEQ15113 449 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 GLRX5Q86SX6 157 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 TMEM151AQ8N4L1 468 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 RNASE6Q93091 150 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 EID2BQ96D98 161 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 NUDT19A8MXV4 375 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 LYZL6O75951 148 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 BPIFB3P59826 476 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 TBRG1Q3YBR2 411 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 ZFP41Q8N8Y5 198 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 TERB2Q8NHR7 220 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 ZAR1LA6NP61 321 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 HPGDSO60760 199 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 IL18BPO95998 194 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 SRMP19623 302 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 TNK1Q13470 666 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 RBMS2Q15434 407 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 NFAM1Q8NET5 270 aaPredicted RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 LPAR2Q9HBW0 351 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 FGF20Q9NP95 211 aaPredicted RBP11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 NTNG1Q9Y2I2 539 aa11.96□□□□□ -0.49
PRPF38A-201ENST00000257181 HMX2A2RU54 273 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 E9PLN8 166 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 AGFG1P52594 562 aaKnown RBP11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 MRPS34P82930 218 aaKnown RBP11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 CALHM3Q86XJ0 350 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 CDH26Q8IXH8 852 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 CMBLQ96DG6 245 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 SEH1LQ96EE3 360 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 VKORC1Q9BQB6 163 aa11.96□□□□□ -0.5
PRPF38A-201ENST00000257181 RAXQ9Y2V3 346 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms