RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TREM2Q9NZC2 230 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 LRP12Q9Y561 859 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 NPTNQ9Y639 398 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 B4DSR2 109 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 H0YL77 283 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ANPEPP15144 967 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 HTR1FP30939 366 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 CD200P41217 278 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 HCCSP53701 268 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 PRSS12P56730 875 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 MZT1Q08AG7 82 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF181Q2M3W8 571 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 AVPI1Q5T686 147 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ZBTB49Q6ZSB9 765 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 KLBQ86Z14 1044 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF679Q8IYX0 411 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 SPERTQ8NA61 448 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ITFG2Q969R8 447 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 EME1Q96AY2 570 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 OR8B4Q96RC9 309 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 SOX7Q9BT81 388 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 NARFLQ9H6Q4 476 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 ADGRL4Q9HBW9 690 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 GCM1Q9NP62 436 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 CLN6Q9NWW5 311 aa20.57■□□□□ 0.88
SDF2L1-201ENST00000248958 TLN2Q9Y4G6 2542 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 C5orf63A6NC05 138 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 SBK2P0C263 348 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 ANOS1P23352 680 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 GATA4P43694 442 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 FAM3AP98173 230 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 OR8G1Q15617 311 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 SLC35F2Q8IXU6 374 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 OR56B2PQ8NGI1 322 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 FAM81AQ8TBF8 368 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 BRD7Q9NPI1 651 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 LPAR3Q9UBY5 353 aa20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 NSD1Q96L73 2696 aaPredicted RBP20.56■□□□□ 0.88
SDF2L1-201ENST00000248958 ANKRD30BLA7E2S9 258 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF670-ZNF695F2Z2N8 137 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 F5H5P2 479 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 WNT9BO14905 357 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 BAG2O95816 211 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 HLA-DPB1P04440 258 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 RIDAP52758 137 aaKnown RBP20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 LMO4P61968 165 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 ZSCAN26Q16670 478 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 FTMTQ8N4E7 242 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 OR51G2Q8NGK0 314 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 CDC42EP3Q9UKI2 254 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 COPS3Q9UNS2 423 aa20.55■□□□□ 0.88
SDF2L1-201ENST00000248958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.54■□□□□ 0.882e-8■■■■□ 26.2
SDF2L1-201ENST00000248958 MALRD1Q5VYJ5 2156 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 hCG_38984A0A1B0GV85 526 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 LRRC30A6NM36 301 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 E9PQ18 207 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 PCMT1P22061 227 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 CA6P23280 308 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 MMP16P51512 607 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 DVL1P1P54792 670 aaPredicted RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 EGR3Q06889 387 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF829Q3KNS6 432 aaPredicted RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ZIK1Q3SY52 487 aaPredicted RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 SLC25A30Q5SVS4 291 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 MEDAGQ5VYS4 303 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 C1orf87Q8N0U7 546 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 PLPP7Q8NBV4 271 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 CSNK2A3Q8NEV1 391 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 GAL3ST1Q99999 423 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ADAT1Q9BUB4 502 aaKnown RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF665Q9H7R5 613 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF319Q9P2F9 582 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 IKZF2Q9UKS7 526 aa20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 FN1P02751 2386 aaKnown RBP20.54■□□□□ 0.88
SDF2L1-201ENST00000248958 ISPDA4D126 451 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 TMEM178BH3BS89 294 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 IGHV2-70P01814 119 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 CXCR4P61073 352 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 SNRPGP62308 76 aaKnown RBP20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 MAB21L1Q13394 359 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 CHRFAM7AQ494W8 412 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 TMEM155Q4W5P6 130 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 ZNF322Q6U7Q0 402 aaPredicted RBP20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 SIGLEC11Q96RL6 698 aa20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 NIPBLQ6KC79 2804 aaeCLIP20.53■□□□□ 0.88
SDF2L1-201ENST00000248958 TMEM269A0A1B0GVZ9 245 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 SNTNA6NMZ2 147 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 FSTL3O95633 263 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 IGHV2-5P01817 119 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR2T7P0C7T2 308 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 IRF2P14316 349 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 ATP6V1E1P36543 226 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 BTG1P62324 171 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 GABPB1Q06547 395 aaPredicted RBP20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR8B8Q15620 311 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 GFOD2Q3B7J2 385 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 MOGAT3Q86VF5 341 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 MUC20Q8N307 709 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms