RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GINS3Q9BRX5 216 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 FRG2CA6NGY1 282 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 ST3GAL2Q16842 350 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 GLDNQ6ZMI3 551 aaPredicted RBP12.08□□□□□ -0.48
NEK4-201ENST00000233027 CAMKMTQ7Z624 323 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 DEFB108BQ8NET1 73 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 ROBO4Q8WZ75 1007 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 TRIB1Q96RU8 372 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NEK4-201ENST00000233027 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 ABCD4O14678 606 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 DSCR3O14972 297 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 SLC31A2O15432 143 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 CXCL13O43927 109 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 CD37P11049 281 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 TRILQ7L0X0 811 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 MMP17Q9ULZ9 603 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 FAHP16930 419 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 YBX1P67809 324 aaKnown RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 PMP22Q01453 160 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SHBQ15464 509 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 C9orf152Q5JTZ5 239 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 OR10P1Q8NGE3 313 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 LHX4Q969G2 390 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 ST3GAL6Q9Y274 331 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 CAPZBP47756 277 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 ZNF816Q0VGE8 651 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 PDCD1Q15116 288 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 MSRB3Q8IXL7 192 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 AMER3Q8N944 861 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SFTA3P0C7M3 94 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 C20orf141Q9NUB4 165 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 H3BP45 60 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 WNT3P56703 355 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SLC25A26Q70HW3 274 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 LINC00615Q96LM1 132 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 PLEKHA2Q9HB19 425 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 RHOFQ9HBH0 211 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 K7EQM0 130 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 SELEP16581 610 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 CD300CQ08708 224 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 C11orf87Q6NUJ2 197 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 CDC20BQ86Y33 519 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 ST8SIA1Q92185 356 aa12.07□□□□□ -0.48
NEK4-201ENST00000233027 ZNF230Q9UIE0 474 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 COL16A1Q07092 1604 aaPredicted RBP12.07□□□□□ -0.48
NEK4-201ENST00000233027 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ATF1P18846 271 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 DTYMKP23919 212 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 SSX1Q16384 188 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 GALNT16Q8N428 558 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 KDF1Q8NAX2 398 aaPredicted RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 AKR7LQ8NHP1 331 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ZGLP1P0C6A0 271 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ACSM4P0C7M7 580 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 RRASP10301 218 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 LGALS4P56470 323 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 CDK5Q00535 292 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 C11orf40Q8WZ69 217 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 TEX101Q9BY14 249 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 NMES1Q9C002 83 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 CHST6Q9GZX3 395 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ANGPTL7O43827 346 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ONECUT2O95948 504 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 RAC1P63000 192 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 INSM1Q01101 510 aaPredicted RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 DMWDQ09019 674 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 NT5CQ8TCD5 201 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 CABLES2Q9BTV7 478 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 LIN7CQ9NUP9 197 aaKnown RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 A0A1W2PR64 198 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 A0A1W2PRV1 198 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 M0R1B8 84 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 OR5G3P0C626 314 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 CLDN15P56746 228 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 PPIAP62937 165 aaKnown RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 ZNF528Q3MIS6 628 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ELFN2Q5R3F8 820 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 SLC16A12Q6ZSM3 486 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 OR52N4Q8NGI2 321 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 OR10X1Q8NGY0 326 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms