RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SELENOFO60613 162 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 TIPRLO75663 272 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 HMGN1P05114 100 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 WNT2P09544 360 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 ANXA8P13928 327 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
GPN3-201ENST00000228827 NAA10P41227 235 aaPredicted RBP11.91□□□□□ -0.5
GPN3-201ENST00000228827 CDK5Q00535 292 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 ZNF154Q13106 437 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 TIGD6Q17RP2 521 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 ZNF181Q2M3W8 571 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 FAM57BQ71RH2 274 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 SHFQ7M4L6 423 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 KLBQ86Z14 1044 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 CPOQ8IVL8 374 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 TIGD4Q8IY51 512 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 BBS1Q8NFJ9 593 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 Q8TCH9 128 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 RNF133Q8WVZ7 376 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 PLEKHA8Q96JA3 519 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 SLC22A4Q9H015 551 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 MARCH7Q9H992 704 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 FN3KRPQ9HA64 309 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 MRPL15Q9P015 296 aaKnown RBP11.91□□□□□ -0.5
GPN3-201ENST00000228827 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 OR5V1Q9UGF6 321 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 NOP16Q9Y3C1 178 aaKnown RBP11.91□□□□□ -0.5
GPN3-201ENST00000228827 AUP1Q9Y679 476 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 A8MXK9 166 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 XRCC2O43543 280 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 GMDSO60547 372 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 GRPP07492 148 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 H2BFMP0C1H6 154 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 ZNF12P17014 697 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
GPN3-201ENST00000228827 RPS7P62081 194 aaKnown RBP11.9□□□□□ -0.5
GPN3-201ENST00000228827 GNB2P62879 340 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 ZNF404Q494X3 552 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 SLC16A9Q7RTY1 509 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 BPIFB2Q8N4F0 458 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 PAPD5Q8NDF8 572 aaKnown RBP11.9□□□□□ -0.5
GPN3-201ENST00000228827 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 ERGIC1Q969X5 290 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
GPN3-201ENST00000228827 TOR3AQ9H497 397 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 OPA3Q9H6K4 179 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 NTN4Q9HB63 628 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 RNF7Q9UBF6 113 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 POLR3KQ9Y2Y1 108 aaPredicted RBP11.9□□□□□ -0.5
GPN3-201ENST00000228827 INSIG2Q9Y5U4 225 aa11.9□□□□□ -0.5
GPN3-201ENST00000228827 FSHBP01225 129 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 LYNP07948 512 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 CD80P33681 288 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 OPRL1P41146 370 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 BNIP1Q12981 228 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SGK3Q96BR1 496 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 PGAM5Q96HS1 289 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SUCNR1Q9BXA5 334 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 MMADHCQ9H3L0 296 aaPredicted RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 TVP23BQ9NYZ1 205 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 STAB1Q9NY15 2570 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 DYSFO75923 2080 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 A6NLC8 198 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 ANKRD30BLA7E2S9 258 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 PITPNBP48739 271 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 DAPP51397 102 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 HILS1P60008 231 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 FAM3AP98173 230 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 APOFQ13790 326 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SNAPC1Q16533 368 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 ZNF826PQ6ZT77 177 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 OR8S1Q8NH09 359 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 OTOSQ8NHW6 89 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 TEX12Q9BXU0 123 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 SP140LQ9H930 580 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 PAPOLBQ9NRJ5 636 aaKnown RBP11.89□□□□□ -0.51
GPN3-201ENST00000228827 ZNF319Q9P2F9 582 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 KLHDC2Q9Y2U9 406 aa11.89□□□□□ -0.51
GPN3-201ENST00000228827 IGHV3OR16-10A0A075B7F0 116 aa11.88□□□□□ -0.51
GPN3-201ENST00000228827 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
GPN3-201ENST00000228827 PRODHO43272 600 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms