RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TBX5Q99593 518 aa10.73□□□□□ -0.69
LSM5-201ENST00000223084 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
LSM5-201ENST00000223084 WARS2Q9UGM6 360 aaKnown RBP10.73□□□□□ -0.69
LSM5-201ENST00000223084 GMPPBQ9Y5P6 360 aa10.73□□□□□ -0.69
LSM5-201ENST00000223084 ANK3Q12955 4377 aaKnown RBP10.73□□□□□ -0.69
LSM5-201ENST00000223084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
LSM5-201ENST00000223084 NSD1Q96L73 2696 aaPredicted RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 ENTPD6O75354 484 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 APOC1P02654 83 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 ZNF16P17020 682 aaPredicted RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 CA6P23280 308 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 CXCR4P61073 352 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 FAM3AP98173 230 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 CYB5R2Q6BCY4 276 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 KCTD18Q6PI47 426 aaPredicted RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 SSX6Q7RTT6 188 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 ZNF420Q8TAQ5 688 aaPredicted RBP10.72□□□□□ -0.69
LSM5-201ENST00000223084 REEP6Q96HR9 211 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 MEGF10Q96KG7 1140 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 LYZL4Q96KX0 146 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 APOL4Q9BPW4 351 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 OR10A2Q9H208 303 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 CLN6Q9NWW5 311 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 IKZF2Q9UKS7 526 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 TMEM14AQ9Y6G1 99 aa10.72□□□□□ -0.69
LSM5-201ENST00000223084 hCG_38984A0A1B0GV85 526 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 A0A1B0GWJ7 208 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 CLDN25C9JDP6 229 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 ZNF670-ZNF695F2Z2N8 137 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 DLGAP1O14490 977 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 TNFRSF1AP19438 455 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 PEX2P28328 305 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 GZMKP49863 264 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 SNRPGP62308 76 aaKnown RBP10.71□□□□□ -0.69
LSM5-201ENST00000223084 ROM1Q03395 351 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 OR8G1Q15617 311 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 C6orf52Q5T4I8 152 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
LSM5-201ENST00000223084 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.69
LSM5-201ENST00000223084 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
LSM5-201ENST00000223084 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 ZNF679Q8IYX0 411 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 OR10H4Q8NGA5 316 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 OR8B12Q8NGG6 310 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 OR52H1Q8NGJ2 320 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 TRUB1Q8WWH5 349 aaKnown RBP10.71□□□□□ -0.69
LSM5-201ENST00000223084 ASB17Q8WXJ9 295 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 PPP1R14AQ96A00 147 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 MSI2Q96DH6 328 aaKnown RBP10.71□□□□□ -0.69
LSM5-201ENST00000223084 MROQ9BYG7 248 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 PPP1R3EQ9H7J1 279 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 NIPAL2Q9H841 368 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 SP140LQ9H930 580 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 FAM118AQ9NWS6 357 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 PPP1R3CQ9UQK1 317 aa10.71□□□□□ -0.69
LSM5-201ENST00000223084 LOC100289279A0A1B0GTE1 492 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 LOC100130705A0A1B0GUX0 176 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 TMEM269A0A1B0GVZ9 245 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 A0A1W2PQL4 384 aaPredicted RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 HOXB4P17483 251 aaPredicted RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 GABRB1P18505 474 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 ATP6V1E1P36543 226 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 PMELP40967 661 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 SRP9P49458 86 aaKnown RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 GSK3AP49840 483 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 RIDAP52758 137 aaKnown RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 LMO4P61968 165 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 MFGE8Q08431 387 aaPredicted RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 OCLNQ16625 522 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 PRAMEF6Q5VXH4 476 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 DEGS2Q6QHC5 323 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 MOGAT3Q86VF5 341 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 ENTHD1Q8IYW4 607 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 RAB1CQ92928 201 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 RFKQ969G6 155 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 RNFT2Q96EX2 444 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 ADAT1Q9BUB4 502 aaKnown RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 OPA3Q9H6K4 179 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 FAM206AQ9NX38 181 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
LSM5-201ENST00000223084 ARHGAP32A7KAX9 2087 aa10.7□□□□□ -0.7
LSM5-201ENST00000223084 ISPDA4D126 451 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 FAM157AC9JC47 383 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 PHYHO14832 338 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ZNF254O75437 659 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ZNF205O95201 554 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 CYB5R3P00387 301 aaPredicted RBP10.69□□□□□ -0.7
LSM5-201ENST00000223084 PNPP00491 289 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 TGFAP01135 160 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ACKR3P25106 362 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 MMP16P51512 607 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms