RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 ST3GAL4Q11206 333 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 ZMAT1Q5H9K5 638 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
UPK1A-201ENST00000222275 GGHQ92820 318 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 CACNG6Q9BXT2 260 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
UPK1A-201ENST00000222275 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 MRM2Q9UI43 246 aaKnown RBP11.68□□□□□ -0.54
UPK1A-201ENST00000222275 GNG8Q9UK08 70 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 MYRFQ9Y2G1 1151 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 R4GMQ9 66 aa11.68□□□□□ -0.54
UPK1A-201ENST00000222275 STAB1Q9NY15 2570 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 A0A1W2PPW3 197 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 INAFM1C9JVW0 142 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 TBX1O43435 398 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 DDOSTP39656 456 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 SWI5Q1ZZU3 235 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 AHSA2Q719I0 299 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 PGAP1Q75T13 922 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
UPK1A-201ENST00000222275 LHFPL3Q86UP9 236 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 KLHL36Q8N4N3 616 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 HAVCR1Q96D42 359 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 TRMT61AQ96FX7 289 aaKnown RBP11.67□□□□□ -0.54
UPK1A-201ENST00000222275 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
UPK1A-201ENST00000222275 DYNLRB1Q9NP97 96 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 NUFIP1Q9UHK0 495 aaKnown RBP11.67□□□□□ -0.54
UPK1A-201ENST00000222275 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
UPK1A-201ENST00000222275 N6AMT1Q9Y5N5 214 aa11.67□□□□□ -0.54
UPK1A-201ENST00000222275 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 M0R233 179 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PSMD9O00233 223 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 XPNPEP2O43895 674 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 SSX4O60224 188 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 ATP6V1B1P15313 513 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 KITLGP21583 273 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PPOXP50336 477 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 GBX2P52951 348 aaPredicted RBP11.66□□□□□ -0.54
UPK1A-201ENST00000222275 NKPD1Q17RQ9 610 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 SPATA46Q5T0L3 261 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 BCL2L15Q5TBC7 163 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 SSX6Q7RTT6 188 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PRSS45Q7RTY3 260 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 NAA40Q86UY6 237 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 ZNF786Q8N393 782 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 CCDC54Q8NEL0 328 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 SPSB4Q96A44 273 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
UPK1A-201ENST00000222275 TTTY10Q9BZA0 68 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 FAM206AQ9NX38 181 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PTTG3PQ9NZH4 202 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 ERGIC3Q9Y282 383 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 NOP16Q9Y3C1 178 aaKnown RBP11.66□□□□□ -0.54
UPK1A-201ENST00000222275 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
UPK1A-201ENST00000222275 TMEM129A0AVI4 362 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 PRR32B1ATL7 298 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 J3QLW9 94 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 MYL12BO14950 172 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 MRPS14O60783 128 aaKnown RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 MTRF1O75570 445 aaKnown RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 CDK1P06493 297 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 HTR1AP08908 422 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 LIMS3P0CW19 117 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 LIMS4P0CW20 117 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 SLC2A1P11166 492 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 ZNF19P17023 458 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 CCR9P51686 369 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 ERVS71-1P61550 626 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 PSG7Q13046 419 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 GK2Q14410 553 aaPredicted RBP11.65□□□□□ -0.54
UPK1A-201ENST00000222275 MSMPQ1L6U9 139 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 TP53I3Q53FA7 332 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 FDX2Q6P4F2 183 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 CSNK2A3Q8NEV1 391 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 OR52N1Q8NH53 320 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 REEP6Q96HR9 211 aa11.65□□□□□ -0.54
UPK1A-201ENST00000222275 C4orf36Q96KX1 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms