RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ERGIC1Q969X5 290 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 CLEC5AQ9NY25 188 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 SH2D1BO14796 132 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 TCAPO15273 167 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 PRDX4Q13162 271 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 AANATQ16613 207 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 R4GMQ9 66 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 GPR171O14626 319 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ARPC3O15145 178 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 DTYMKP23919 212 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF787Q6DD87 383 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 KIAA1958Q8N8K9 716 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 IGHV3-43A0A0B4J1X8 118 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 CDC14BO60729 498 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 IGHV3-43DP0DP04 118 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 PSMB6P28072 239 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF85Q03923 595 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ACY3Q96HD9 319 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ZNF835Q9Y2P0 537 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC25A4P12235 298 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 HSD17B7P56937 341 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 EXT1Q16394 746 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 TMEM196Q5HYL7 178 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 MENTQ9BUN1 341 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ADGRL4Q9HBW9 690 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC35D1Q9NTN3 355 aa12.28□□□□□ -0.44
TGFBR3-201ENST00000212355 ALX3O95076 343 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 WNT11O96014 354 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 FCRL6Q6DN72 434 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC39A7Q92504 469 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 TIMM10BQ9Y5J6 103 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 ADAM10O14672 748 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 IGLV3-25P01717 112 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 NQO2P16083 231 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 KRTDAPP60985 99 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 WIPI1Q5MNZ9 446 aaPredicted RBP12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 THEM4Q5T1C6 240 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 OR10G3Q8NGC4 313 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 OR2A1Q8NGT9 310 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 OR13D1Q8NGV5 346 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 JAM3Q9BX67 310 aa12.27□□□□□ -0.44
TGFBR3-201ENST00000212355 TSPAN12O95859 305 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 IGLV3-27P01718 113 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 HMGN3Q15651 99 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 DTWD2Q8NBA8 298 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 OR52N4Q8NGI2 321 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 OR5M8Q8NGP6 311 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF331Q9NQX6 463 aaPredicted RBP12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 ATG2BQ96BY7 2078 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 TMEM200CA6NKL6 621 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 EPXP11678 715 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 CTF1Q16619 201 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF793Q6ZN11 406 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 UBE3DQ7Z6J8 389 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 C11orf40Q8WZ69 217 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 SEH1LQ96EE3 360 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 LRRC30A6NM36 301 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 PLRG1O43660 514 aaKnown RBP12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 LHFPL2Q6ZUX7 228 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 S1PR5Q9H228 398 aa12.27□□□□□ -0.45
TGFBR3-201ENST00000212355 TJP1Q07157 1748 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 A0A0A6YYD5 115 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 MGMTP16455 207 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNRF4Q8WWF5 429 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 LOXL2Q9Y4K0 774 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 EIF4E2O60573 245 aaKnown RBP12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 RRADP55042 308 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 ACVR1Q04771 509 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 NUDT9Q9BW91 350 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 FXYD1O00168 92 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 H3F3AP84243 136 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 RABEPKQ7Z6M1 372 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 OR2AK2Q8NG84 335 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 CHEK1O14757 476 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 PRPH2P23942 346 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 FGF8P55075 233 aaPredicted RBP12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 BTG1P62324 171 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 MAP6Q96JE9 813 aa12.26□□□□□ -0.45
TGFBR3-201ENST00000212355 LRRC61Q9BV99 259 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms