RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TVP23BQ9NYZ1 205 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 TMEFF2Q9UIK5 374 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-231ENST00000641939 NPTNQ9Y639 398 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 ISPDA4D126 451 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 H0YL77 283 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 MLNRO43193 412 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 IGHV2-70P01814 119 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 SLC2A1P11166 492 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 ANPEPP15144 967 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 SRD5A1P18405 259 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 SLC2A5P22732 501 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 ANOS1P23352 680 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 HSD11B1P28845 292 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 SRP9P49458 86 aaKnown RBP12.69□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF92Q03936 586 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
PHGDH-231ENST00000641939 GLYATL3Q5SZD4 288 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 IL17RELQ6ZVW7 336 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
PHGDH-231ENST00000641939 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 BBS1Q8NFJ9 593 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 OR2AE1Q8NHA4 323 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 LRTOMTQ8WZ04 291 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 TMEM186Q96B77 213 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 MEGF10Q96KG7 1140 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
PHGDH-231ENST00000641939 GABARAPL1Q9H0R8 117 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 GCM1Q9NP62 436 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 HIF1ANQ9NWT6 349 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
PHGDH-231ENST00000641939 C5orf63A6NC05 138 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 GGT3PA6NGU5 568 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 CD300LBA8K4G0 201 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 F5H5P2 479 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 XRCC2O43543 280 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 SELENOFO60613 162 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 APOC1P02654 83 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 OPRL1P41146 370 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 CX3CR1P49238 355 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 RPS7P62081 194 aaKnown RBP12.68□□□□□ -0.38
PHGDH-231ENST00000641939 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
PHGDH-231ENST00000641939 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 OTOSQ8NHW6 89 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 SIGLEC11Q96RL6 698 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 AMELYQ99218 206 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 SP140LQ9H930 580 aa12.68□□□□□ -0.38
PHGDH-231ENST00000641939 TRAV20A0A0B4J274 112 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 TMEM178BH3BS89 294 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 ANXA2P07355 339 aaKnown RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 LYNP07948 512 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 H2BFMP0C1H6 154 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 SBK2P0C263 348 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 RBMXP38159 391 aaKnown RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 NAA10P41227 235 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 MMP16P51512 607 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 RAD23AP54725 363 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 APOFQ13790 326 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 THEM6Q8WUY1 208 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 CENPNQ96H22 339 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 SLC22A4Q9H015 551 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 UBAP1Q9NZ09 502 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
PHGDH-231ENST00000641939 NOP16Q9Y3C1 178 aaKnown RBP12.67□□□□□ -0.38
PHGDH-231ENST00000641939 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZAR1LA6NP61 321 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 TBX1O43435 398 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 PLPP2O43688 288 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 PRKYO43930 277 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 CA6P23280 308 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 CD200P41217 278 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF121P58317 390 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 BTG1P62324 171 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZMYND11Q15326 602 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 OR8G1Q15617 311 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 TIGD6Q17RP2 521 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF181Q2M3W8 571 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 TMEM155Q4W5P6 130 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 LCN1P1Q5VSP4 162 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF771Q7L3S4 317 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 MOGAT3Q86VF5 341 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 LRRC28Q86X40 367 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 SPICQ8N5J4 248 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 OR52H1Q8NGJ2 320 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 ZNF420Q8TAQ5 688 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-231ENST00000641939 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 TEAD3Q99594 435 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 SEMA6AQ9H2E6 1030 aa12.66□□□□□ -0.38
PHGDH-231ENST00000641939 DNAJC27Q9NZQ0 273 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms