RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TGIF1Q15583 401 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 NDUFA9Q16795 377 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TIMM23BQ5SRD1 257 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 EMBQ6PCB8 327 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF383Q8NA42 475 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 SYT8Q8NBV8 401 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR5B3Q8NH48 314 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR1L3Q8NH93 324 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 RNASEH2CQ8TDP1 164 aaKnown RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 RNF133Q8WVZ7 376 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 UFD1Q92890 307 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OMA1Q96E52 524 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 DNAJA3Q96EY1 480 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 SCMH1Q96GD3 660 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PACRGQ96M98 296 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 SERPINB12Q96P63 405 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 MICU1Q9BPX6 476 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PLAC1Q9HBJ0 212 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TUBA8Q9NY65 449 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR12D3Q9UGF7 316 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 ING1Q9UK53 422 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PPP2R2CQ9Y2T4 447 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 MRPS18BQ9Y676 258 aaKnown RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 DOCK9Q9BZ29 2069 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 LRRK2Q5S007 2527 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PIEZO2Q9H5I5 2752 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 IGHV5-10-1A0A0J9YXX1 117 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 A0A1B0GTI1 187 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 hCG_2039718K7EN88 272 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 HAT1O14929 419 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PPP1R2P9O14990 202 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 WT1P19544 449 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PRPS1L1P21108 318 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 LEPP41159 167 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 ZFP36L2P47974 494 aaKnown RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 HCAR3P49019 387 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 MED21Q13503 144 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 C16orf72Q14CZ0 275 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TRIM16LQ309B1 348 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 COX19Q49B96 90 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PRSS48Q7RTY5 328 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 APLFQ8IW19 511 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR1K1Q8NGR3 316 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR51F2Q8NH61 342 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR5K2Q8NHB8 316 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TEX47Q8TBZ9 253 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 NELFBQ8WX92 580 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 ZBTB9Q96C00 473 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 MOCOSQ96EN8 888 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 OR5B2Q96R09 309 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TCEAL2Q9H3H9 227 aaPredicted RBP6.13□□□□□ -1.43
NECAP1-220ENST00000639841 CENPHQ9H3R5 247 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 KIF26BQ2KJY2 2108 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 TMEM272A0A1B0GTI8 110 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 SAGE2PA6NJ88 616 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF724A8MTY0 619 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 TRDCB7Z8K6 153 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 C21orf140B9A014 251 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 FCN1O00602 326 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 AMTP48728 403 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 EMDP50402 254 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ERVS71-1P61550 626 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 VLDLRP98155 873 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF91Q05481 1191 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ICAM4Q14773 271 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ATP6V1FQ16864 119 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 EIPR1Q53HC9 387 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 OTUD1Q5VV17 481 aaPredicted RBP6.12□□□□□ -1.43
NECAP1-220ENST00000639841 RWDD4Q6NW29 188 aaKnown RBP6.12□□□□□ -1.43
NECAP1-220ENST00000639841 USP43Q70EL4 1123 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 CYP4Z2PQ8N1L4 340 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 UMODL1-AS1Q8N2C9 162 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ACTL9Q8TC94 416 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 CDS1Q92903 461 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF599Q96NL3 588 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 PSD2Q9BQI7 771 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 CCDC28BQ9BUN5 200 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 FAIM2Q9BWQ8 316 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 ABCB10Q9NRK6 738 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 CD274Q9NZQ7 290 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 FBXL3Q9UKT7 428 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 DOPEY2Q9Y3R5 2298 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 MYO9AB2RTY4 2548 aa6.12□□□□□ -1.43
NECAP1-220ENST00000639841 IGHV1OR21-1A0A087WYE8 117 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 hCG_38984A0A1B0GV85 526 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 A0A1W2PPI3 338 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 DCTN6O00399 190 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 ATP6V0E1O15342 81 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 RGS14O43566 566 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 CRYABP02511 175 aaKnown RBP6.11□□□□□ -1.43
NECAP1-220ENST00000639841 IL6P05231 212 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 DPTQ07507 201 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 BCL2L1Q07817 233 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 PNOCQ13519 176 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 TMEM187Q14656 261 aa6.11□□□□□ -1.43
NECAP1-220ENST00000639841 KIR2DS3Q14952 304 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms