RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ZNF141Q15928 474 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 SLC22A25Q6T423 547 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 LGI3Q8N145 548 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 OR4S1Q8NGB4 309 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 REEP6Q96HR9 211 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 GPA33Q99795 319 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 BARHL1Q9BZE3 327 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 ACACAQ13085 2346 aa12.91□□□□□ -0.34
SCARB2-208ENST00000638372 CENPVL1A0A0U1RR11 272 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 HSD17B6O14756 317 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 MPLP40238 635 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 FOXL2P58012 376 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 PEA15Q15121 130 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 ETFDHQ16134 617 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 SLC38A9Q8NBW4 561 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 RBMXL1Q96E39 390 aaKnown RBP12.9□□□□□ -0.34
SCARB2-208ENST00000638372 ZNF764Q96H86 408 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-208ENST00000638372 C4orf45Q96LM5 186 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 TSPAN32Q96QS1 320 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 KCNJ15Q99712 375 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 GFOD1Q9NXC2 390 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 IMPA2O14732 288 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 MPZL1O95297 269 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 MGMTP16455 207 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 PTAFRP25105 342 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 SLC25A1P53007 311 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 CNTNAP3Q9BZ76 1288 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 HAO2Q9NYQ3 351 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 PTPRFP10586 1907 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 TMEM200CA6NKL6 621 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 HSPB2A8KAH6 182 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 D6RAR5 112 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 GIPP09681 153 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-208ENST00000638372 TGM1P22735 817 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 HSPB2Q16082 182 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCARB2-208ENST00000638372 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-208ENST00000638372 ANKRD37Q7Z713 158 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 ZNF321PQ8N8H1 164 aa12.9□□□□□ -0.34
SCARB2-208ENST00000638372 IGKV1-8A0A0C4DH67 115 aa12.9□□□□□ -0.35
SCARB2-208ENST00000638372 WDR1O75083 606 aa12.9□□□□□ -0.35
SCARB2-208ENST00000638372 ZFP36L2P47974 494 aaKnown RBP12.9□□□□□ -0.35
SCARB2-208ENST00000638372 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.35
SCARB2-208ENST00000638372 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.35
SCARB2-208ENST00000638372 MFRPQ9BY79 579 aa12.9□□□□□ -0.35
SCARB2-208ENST00000638372 XRCC3O43542 346 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 SSX4O60224 188 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 LALBAP00709 142 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 PDGFAP04085 211 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 SERPINF1P36955 418 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 DSCR4P56555 118 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-208ENST00000638372 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 NOXO1Q8NFA2 376 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 PTP4A1Q93096 173 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 TMEM100Q9NV29 134 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 SNCAP37840 140 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 AKR1C1Q04828 323 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-208ENST00000638372 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 OR2AK2Q8NG84 335 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 C22orf15Q8WYQ4 148 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 TRIB1Q96RU8 372 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 SLC52A3Q9NQ40 469 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 EDARQ9UNE0 448 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 PUS1Q9Y606 427 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCARB2-208ENST00000638372 A0A087WZY1 265 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 OR4E1P0C645 316 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 INSM1Q01101 510 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-208ENST00000638372 C17orf107Q6ZR85 190 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 PCOLCE2Q9UKZ9 415 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
SCARB2-208ENST00000638372 MT-CO2P00403 227 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 MMP15P51511 669 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 AGFG1P52594 562 aaKnown RBP12.88□□□□□ -0.35
SCARB2-208ENST00000638372 MVDP53602 400 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 IL11RAQ14626 422 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 OR14K1Q8NGZ2 314 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 IP6K3Q96PC2 410 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 BIN3Q9NQY0 253 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-208ENST00000638372 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 OR5H14A6NHG9 310 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 NFYBP25208 207 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 HAAOP46952 286 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 UBE2IP63279 158 aaKnown RBP12.88□□□□□ -0.35
SCARB2-208ENST00000638372 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 OR8B8Q15620 311 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 ESCO2Q56NI9 601 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 TFAP2EQ6VUC0 442 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
SCARB2-208ENST00000638372 OR11L1Q8NGX0 322 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms