RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NABP1Q96AH0 204 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 ZNF775Q96BV0 537 aaPredicted RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 GPR137Q96N19 417 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 CHIAQ9BZP6 476 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 CA10Q9NS85 328 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 FOXD3Q9UJU5 478 aaPredicted RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 RAB27BO00194 218 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 SMAD9O15198 467 aaKnown RBP18.96■□□□□ 0.63
CLN6-224ENST00000638076 DHHO43323 396 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 RAB12Q6IQ22 244 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 FOXL2NBQ6ZUU3 175 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 RNF144BQ7Z419 303 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 ANGPTL5Q86XS5 388 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 BEST3Q8N1M1 668 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 SNAPC3Q92966 411 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 SLCO5A1Q9H2Y9 848 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 WIPF3A6NGB9 483 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 E9PLN8 166 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 TOXO94900 526 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 RAB3DO95716 219 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 CCL1P22362 96 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 RAC3P60763 192 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 C6orf183Q5T699 404 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 NAA40Q86UY6 237 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 CMBLQ96DG6 245 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 DDA1Q9BW61 102 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 KLK13Q9UKR3 277 aa18.96■□□□□ 0.63
CLN6-224ENST00000638076 C9orf172C9J069 976 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 G3V3Q6 166 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 M0QYG6 137 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 CYB5AP00167 134 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 SERPINA7P05543 415 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 ZNF528Q3MIS6 628 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 DOK3Q7L591 496 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 OR5AS1Q8N127 324 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 GALNT16Q8N428 558 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 AQP3Q92482 292 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 ULBP2Q9BZM5 246 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 SPRY4Q9C004 299 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 DEPPQ9NTK1 212 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 RYDENQ9NUL5 291 aaKnown RBP18.95■□□□□ 0.62
CLN6-224ENST00000638076 PCSK5Q92824 1860 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 C5orf63A6NC05 138 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 OR5H15A6NDH6 313 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 LRRC3CA6NJW4 275 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 F5H5K5 113 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 F10P00742 488 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 CTSSP25774 331 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 HTR2BP41595 481 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 ZNF260Q3ZCT1 412 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 PGAP1Q75T13 922 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 KCNE4Q8WWG9 221 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 PNPLA2Q96AD5 504 aa18.95■□□□□ 0.62
CLN6-224ENST00000638076 TINAGL1Q9GZM7 467 aaPredicted RBP18.95■□□□□ 0.62
CLN6-224ENST00000638076 EIF3KQ9UBQ5 218 aaKnown RBP18.95■□□□□ 0.62
CLN6-224ENST00000638076 CYB561P49447 251 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 SUCLG1P53597 346 aaKnown RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 OC90Q02509 493 aaPredicted RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 ZNF767PQ75MW2 155 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 CHMP1BQ7LBR1 199 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 CHST4Q8NCG5 386 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 ZNF837Q96EG3 531 aaPredicted RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 PGAM5Q96HS1 289 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 SF3B5Q9BWJ5 86 aaKnown RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 EXO5Q9H790 373 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 TRAPPC6AO75865 159 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 SLC6A9P48067 706 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 CARD18P57730 90 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 LGALSLQ3ZCW2 172 aaPredicted RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 GGNQ86UU5 652 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 C20orf196Q8IYI0 205 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 ZNF101Q8IZC7 436 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 INTS12Q96CB8 462 aaKnown RBP18.94■□□□□ 0.62
CLN6-224ENST00000638076 FOXJ2Q9P0K8 574 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 PIPOXQ9P0Z9 390 aa18.94■□□□□ 0.62
CLN6-224ENST00000638076 NCOA6Q14686 2063 aaPredicted RBP18.93■□□□□ 0.62
CLN6-224ENST00000638076 UBE2QL1A1L167 161 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 ZNF736B4DX44 427 aaPredicted RBP18.93■□□□□ 0.62
CLN6-224ENST00000638076 DNPH1O43598 174 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 AMY2AP04746 511 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 ZNF84P51523 738 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 CDNFQ49AH0 187 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 IDO2Q6ZQW0 420 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 OR8H1Q8NGG4 311 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 PSMF1Q92530 271 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 SFXN2Q96NB2 322 aa18.93■□□□□ 0.62
CLN6-224ENST00000638076 TMEM14DPA8MWL7 114 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 HCKP08631 526 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 CD59P13987 128 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 STARP49675 285 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 WIPI1Q5MNZ9 446 aaPredicted RBP18.92■□□□□ 0.62
CLN6-224ENST00000638076 GLIPR1L1Q6UWM5 242 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 FJX1Q86VR8 437 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 ZNF584Q8IVC4 421 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 CDH26Q8IXH8 852 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 OR14K1Q8NGZ2 314 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 THOC3Q96J01 351 aaKnown RBP18.92■□□□□ 0.62
CLN6-224ENST00000638076 LYZL4Q96KX0 146 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 CHST6Q9GZX3 395 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 A0A1W2PNU3 283 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms