RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 POMPQ9Y244 141 aa14.88□□□□□ -0.03
PNKP-230ENST00000638016 A0A1B0GWJ7 208 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 TCRBV3S1A0A5B6 114 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 CD300LBA8K4G0 201 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 CEACAM18A8MTB9 384 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
PNKP-230ENST00000638016 TRAPPC2LH3BP13 241 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 FKBP6O75344 327 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 E2F6O75461 281 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 IFNGP01579 166 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 EPHA1P21709 976 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 CA6P23280 308 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 SRP9P49458 86 aaKnown RBP14.87□□□□□ -0.03
PNKP-230ENST00000638016 CBX1P83916 185 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 MALLQ13021 153 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 EIF2B1Q14232 305 aaKnown RBP14.87□□□□□ -0.03
PNKP-230ENST00000638016 GINS1Q14691 196 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 MPPED2Q15777 294 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 DNAL1Q4LDG9 190 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 TMEM155Q4W5P6 130 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 DPY19L4Q7Z388 723 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 KLHL36Q8N4N3 616 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 SPICQ8N5J4 248 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 CADM1Q9BY67 442 aaKnown RBP14.87□□□□□ -0.03
PNKP-230ENST00000638016 OR51V1Q9H2C8 321 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 C7orf69Q9H7B7 122 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 UFSP2Q9NUQ7 469 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 DOCK11Q5JSL3 2073 aa14.87□□□□□ -0.03
PNKP-230ENST00000638016 ARRDC5A6NEK1 342 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 MDH2P40926 338 aaKnown RBP14.86□□□□□ -0.03
PNKP-230ENST00000638016 TAF13Q15543 124 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 TMEM236Q5W0B7 351 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 SLC27A4Q6P1M0 643 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 PLBD1Q6P4A8 553 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 DRAM2Q6UX65 266 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 C1QL2Q7Z5L3 287 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.86□□□□□ -0.03
PNKP-230ENST00000638016 DEFB108BQ8NET1 73 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 BBS1Q8NFJ9 593 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 SEMA6DQ8NFY4 1073 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 OR56B2PQ8NGI1 322 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 SPRYD4Q8WW59 207 aaPredicted RBP14.86□□□□□ -0.03
PNKP-230ENST00000638016 C22orf15Q8WYQ4 148 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 ZMYND19Q96E35 227 aaPredicted RBP14.86□□□□□ -0.03
PNKP-230ENST00000638016 KCNJ15Q99712 375 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 ABHD6Q9BV23 337 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 TMEM165Q9HC07 324 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 DNAJC27Q9NZQ0 273 aa14.86□□□□□ -0.03
PNKP-230ENST00000638016 ZNF878C9JN71 531 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 SELENOFO60613 162 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 FAM20BO75063 409 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 DNAJC8O75937 253 aaPredicted RBP14.85□□□□□ -0.03
PNKP-230ENST00000638016 GSTT1P30711 240 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 RAD23AP54725 363 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 TEX30Q5JUR7 227 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 LIPNQ5VXI9 398 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 TIGD4Q8IY51 512 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 INTS14Q96SY0 518 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 ADAT1Q9BUB4 502 aaKnown RBP14.85□□□□□ -0.03
PNKP-230ENST00000638016 PPP1R3EQ9H7J1 279 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 NTN4Q9HB63 628 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 KLHDC2Q9Y2U9 406 aa14.85□□□□□ -0.03
PNKP-230ENST00000638016 GGT3PA6NGU5 568 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 TBX1O43435 398 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 FOXH1O75593 365 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 TIPRLO75663 272 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 GLCEO94923 617 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 FSHBP01225 129 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 CD200P41217 278 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 CX3CR1P49238 355 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 OR8G1Q15617 311 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 LYPD2Q6UXB3 125 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 POP5Q969H6 163 aaKnown RBP14.84□□□□□ -0.03
PNKP-230ENST00000638016 SLC6A7Q99884 636 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 TMEM246Q9BRR3 403 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 BRD7Q9NPI1 651 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 ZNF319Q9P2F9 582 aa14.84□□□□□ -0.03
PNKP-230ENST00000638016 ANK2Q01484 3957 aa14.83□□□□□ -0.03
PNKP-230ENST00000638016 FBN3Q75N90 2809 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 J3QLI3 93 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 GSC2O15499 205 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 ANXA2P07355 339 aaKnown RBP14.83□□□□□ -0.04
PNKP-230ENST00000638016 WNT2P09544 360 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 OSMP13725 252 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 RPS2P15880 293 aaKnown RBP14.83□□□□□ -0.04
PNKP-230ENST00000638016 NAA10P41227 235 aaPredicted RBP14.83□□□□□ -0.04
PNKP-230ENST00000638016 GATA4P43694 442 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 CDK5Q00535 292 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 BNIP1Q12981 228 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 GK3PQ14409 553 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 KLHL12Q53G59 568 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 FAM57BQ71RH2 274 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 PRSS45Q7RTY3 260 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 CPOQ8IVL8 374 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 BOLLQ8N9W6 283 aaKnown RBP14.83□□□□□ -0.04
PNKP-230ENST00000638016 PAPD5Q8NDF8 572 aaKnown RBP14.83□□□□□ -0.04
PNKP-230ENST00000638016 MARCH7Q9H992 704 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 DNAJB9Q9UBS3 223 aa14.83□□□□□ -0.04
PNKP-230ENST00000638016 A8MXK9 166 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 PRR23D1E9PI22 279 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms