RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 HKR1P10072 659 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 RPS2P15880 293 aaKnown RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 EGR1P18146 543 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ATP6V1B2P21281 511 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 PRTN3P24158 256 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 NOS3P29474 1203 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 PSMB10P40306 273 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 CD200P41217 278 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 RPS27P42677 84 aaKnown RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 MAGEA2P43356 314 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 PCK2Q16822 640 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ESCO2Q56NI9 601 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 AWAT1Q58HT5 328 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ARMCX4Q5H9R4 360 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 FAM201AQ5SY85 155 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ZNF841Q6ZN19 808 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 LIAT1Q6ZQX7 453 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 C9orf139Q6ZV77 190 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 DEFB107AQ8IZN7 70 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 CYB561A3Q8NBI2 242 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 SLC37A3Q8NCC5 494 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 OR9Q2Q8NGE9 314 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 OR8D4Q8NGM9 314 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 OR2AJ1Q8NGZ0 328 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ERGIC1Q969X5 290 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 SLCO4A1Q96BD0 722 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 UPRTQ96BW1 309 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 NEIL1Q96FI4 390 aaPredicted RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 MRI1Q9BV20 369 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 CDADC1Q9BWV3 514 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 SSBP3Q9BWW4 388 aaPredicted RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 NMNAT2Q9BZQ4 307 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 NSRP1Q9H0G5 558 aaKnown RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 DDX28Q9NUL7 540 aaKnown RBP6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 MIOXQ9UGB7 285 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 OR5V1Q9UGF6 321 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 KCNG2Q9UJ96 466 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 ARL2BPQ9Y2Y0 163 aa6.11□□□□□ -1.43
CACNA1A-222ENST00000636022 DNAH3Q8TD57 4116 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 TCRBV5S2A0A599 114 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 C5orf63A6NC05 138 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 DNAJC9-AS1A6NH13 148 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 TVP23AA6NH52 213 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 CD300LBA8K4G0 201 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 CLDN34H7C241 214 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 M0R135 149 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 TNFRSF11BO00300 401 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 GMDSO60547 372 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 FAM20BO75063 409 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PLATP00750 562 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 HLA-DQA2P01906 255 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 RNASE1P07998 156 aaKnown RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 CA6P23280 308 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PYCR1P32322 319 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 TPTEP56180 551 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 ZNF92Q03936 586 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 MALLQ13021 153 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 MPPED2Q15777 294 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 SNAI3Q3KNW1 292 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PRAMEF6Q5VXH4 476 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 RPL13AP3Q6NVV1 102 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 LYPD4Q6UWN0 246 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 C16orf89Q6UX73 402 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 LYPD2Q6UXB3 125 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 LRRN1Q6UXK5 716 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 CYP2R1Q6VVX0 501 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 RASSF6Q6ZTQ3 369 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PGAP1Q75T13 922 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 C1orf87Q8N0U7 546 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PARP8Q8N3A8 854 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 LNX2Q8N448 690 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 LINC00471Q8N535 108 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 PROKR2Q8NFJ6 384 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 OR51L1Q8NGJ5 315 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 OR2T4Q8NH00 348 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 OR4Q3Q8NH05 313 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 OR2AE1Q8NHA4 323 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 SGMS2Q8NHU3 365 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 FAM81AQ8TBF8 368 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 RAB40AQ8WXH6 277 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 SPTSSAQ969W0 71 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 ZMYND19Q96E35 227 aaPredicted RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 ZNF799Q96GE5 643 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 ZMAT3Q9HA38 289 aaKnown RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 NDE1Q9NXR1 346 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 VNN3Q9NY84 501 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 ACTR3BQ9P1U1 418 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 SOX21Q9Y651 276 aaPredicted RBP6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 COMMD3-BMI1R4GMX3 469 aa6.1□□□□□ -1.43
CACNA1A-222ENST00000636022 C22orf46C9J442 243 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 PHYHO14832 338 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 DCTN3O75935 186 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 CCNB2O95067 398 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 ZNF823P16415 610 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 SPI1P17947 270 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 PITPNBP48739 271 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 SLC25A1P53007 311 aa6.09□□□□□ -1.43
CACNA1A-222ENST00000636022 GNB2P62879 340 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms